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The annotation and conditions in this rule are derived from the following entries: P32171 (RHAB_ECOLI)

If a protein meets these conditions... i

Common conditions

    • Matches HAMAP signature MF_01535
    • taxon = Bacteria
    • fragment ≠ the sequence is fragmented

Special conditions

    • Subsequence at position 68 - 222 aligns to "C-x*-C" in entry P32171
    • Subsequence at position 353 - 370 aligns to "C-x*-C" in entry P32171
    • Subsequence at position 413 - 417 aligns to "C-x*-C" in entry P32171
    • Subsequence at position 68 - 222 aligns to "C-x*-C" in entry P32171
    • Subsequence at position 236 - 238 aligns to "H-D-T" in entry P32171 (individually applies "Substrate binding")
    • Subsequence at position 304 - 304 aligns to "[QNE]" in entry P32171 (individually applies "ATP")
    • Subsequence at position 13 - 17 aligns to "A-[ST]-x(2)-R" in entry P32171 (individually applies "ATP")
    • Subsequence at position 237 - 237 aligns to "D" in entry P32171 (individually applies "Proton acceptor")
    • Subsequence at position 402 - 402 aligns to "G" in entry P32171 (individually applies "ATP; via amide nitrogen")
    • Subsequence at position 296 - 296 aligns to "N" in entry P32171 (individually applies "Substrate")
    • Subsequence at position 83 - 83 aligns to "[GA]" in entry P32171 (individually applies "Substrate; via amide nitrogen and carbonyl oxygen")
    • Subsequence at position 259 - 259 aligns to "T" in entry P32171 (individually applies "ATP")
    • Subsequence at position 353 - 370 aligns to "C-x*-C" in entry P32171
    • Subsequence at position 413 - 417 aligns to "C-x*-C" in entry P32171

... then these annotations are applied i

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namei

  • Recommended name:
    Rhamnulokinase (EC:2.7.1.5)
    Short name:
    RhaB
    Alternative name(s):
    Rhamnulose kinase
    L-rhamnulose 1-kinase
    ATP:L-rhamnulose phosphotransferase

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namei

  • Name:rhaB

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> describes the function(s) of a protein.<p><a href='/help/function' target='_top'>More...</a></p>Functioni

  • Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate.

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section describes the metabolic pathway(s) associated with a protein.<p><a href='/help/pathway' target='_top'>More...</a></p>Pathwayi

  • Pathwayi: L-rhamnose degradation

    This protein is involved in step 2 of the subpathway that synthesizes glycerone phosphate from L-rhamnose. This subpathway is part of the pathway L-rhamnose degradation, which is itself part of Carbohydrate degradation.
    View all proteins of this organism that are known to be involved in the subpathway that synthesizes glycerone phosphate from L-rhamnose, the pathway L-rhamnose degradation and in Carbohydrate degradation.

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

  • Monomer.

<p>This subsection of the ‘Function’ section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni

  • Substrate binding (to residues corresponding to positions 236 - 238)

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei

  • Proton acceptor (to residues corresponding to position 237)

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei

  • ATP (to residues corresponding to position 304)
  • ATP; via amide nitrogen (to residues corresponding to position 402)
  • Substrate (to residues corresponding to position 296)
  • Substrate; via amide nitrogen and carbonyl oxygen (to residues corresponding to position 83)
  • ATP (to residues corresponding to position 259)

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi

  • ATP (to residues corresponding to positions 13 - 17)

<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi

  • (to residues corresponding to positions 68 - 222)
  • (to residues corresponding to positions 353 - 370)
  • (to residues corresponding to positions 413 - 417)

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO (Gene Ontology) termsi

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