W5VSL5 · W5VSL5_AVIMR
- ProteinCRT/DRE-binding factor 3
- GeneCBF3
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids242 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA binding | |
Molecular Function | DNA-binding transcription factor activity | |
Biological Process | defense response |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > asterids > lamiids > Lamiales > Acanthaceae > Avicennioideae > Avicennia
Accessions
- Primary accessionW5VSL5
Subcellular Location
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-23 | Basic and acidic residues | ||||
Sequence: MNNKDPLLDRDSLTHDSDPHPLG | ||||||
Region | 1-69 | Disordered | ||||
Sequence: MNNKDPLLDRDSLTHDSDPHPLGSEHWSLEFPAASSPSSDGRNAPPANFSDEEVMLASSYPKKRAGRKK | ||||||
Compositional bias | 31-45 | Polar residues | ||||
Sequence: FPAASSPSSDGRNAP | ||||||
Domain | 77-134 | AP2/ERF | ||||
Sequence: VYRGVRRRDSGKWVCEVREPNKKSRIWLGTFLTAEMAARAHDVAALALRGRSACLNFA | ||||||
Region | 167-187 | Disordered | ||||
Sequence: LETVSADESRQENNNESKELA |
Sequence similarities
Belongs to the AP2/ERF transcription factor family. ERF subfamily.
Family and domain databases
Sequence
- Sequence statusComplete
- Length242
- Mass (Da)26,791
- Last updated2014-04-16 v1
- ChecksumB4A6AFC9C12EF297
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-23 | Basic and acidic residues | ||||
Sequence: MNNKDPLLDRDSLTHDSDPHPLG | ||||||
Compositional bias | 31-45 | Polar residues | ||||
Sequence: FPAASSPSSDGRNAP |