V5AI96 · V5AI96_9PROT

Function

function

DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytosol
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular Functionnucleic acid binding
Molecular FunctionRNA helicase activity
Biological Processribosomal large subunit assembly

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    ATP-dependent RNA helicase RhlE
  • EC number

Gene names

    • Name
      rhlE_1
    • Synonyms
      rhlE
    • ORF names
      MOLA814_00866

Organism names

Accessions

  • Primary accession
    V5AI96

Proteomes

Subcellular Location

Keywords

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain, motif, region, compositional bias.

Type
IDPosition(s)Description
Domain13-41DEAD-box RNA helicase Q
Motif13-41Q motif
Domain44-217Helicase ATP-binding
Domain240-393Helicase C-terminal
Region434-621Disordered
Compositional bias453-481Polar residues
Compositional bias497-511Polar residues
Compositional bias534-557Basic and acidic residues

Sequence similarities

Belongs to the DEAD box helicase family. RhlE subfamily.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    621
  • Mass (Da)
    65,954
  • Last updated
    2014-01-22 v1
  • Checksum
    40E284B9749A6142
MHQCRHTAPIISMTFEELNLAPAILDAVREQGYETPTPVQAQAIPAVLAGLDVLAGAQTGTGKTAGFTLPILHLLSQRERKSNAVRALILTPTRELAAQVEESVRTYGKHLDLTSTVVFGGVGMNPQVKKLRSGVDILVATPGRLLDLVGQGVLDLTQVEILVLDEADRMLDMGFIHDVKKVLALVPANKQSLLFSATFSDEIRSLANNLLRDPLHIQVTPKNTTVQRIAQWIYPVGRSRKKELLAHVIQENNWSQVLVFTRTKFGANHVAQFLSDNGINAMALHGNKSQAARTQALAGFKSGDVRALVATDIAARGIDIDDLPHVVNFEIPNISEDYVHRIGRTGRAGASGEAVSLVCMDEEGFMQDVERFINQRIEVKIIDGFGPAEGEKAEPIAMGRQVLWGGIGKPPARDVMAAAGKAARGEMMQRIREKKTTGGAPNSGGGGRNGGGQGRRNPSSANGPRQETGAGSEGQQDGRNPESRGNPRRRPQRNAPGAGQGGQTSRNDGPQGQGFRPERGNEALGNGPRRNASGPRQDRGEPRQDRGEPRDHTGSRQPDPLRTSIDALSERRGGNGGGNRRSGPSGNRSGGGGGGGGGGGGGGNSSRGGADPLRTSFGRIK

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias453-481Polar residues
Compositional bias497-511Polar residues
Compositional bias534-557Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AYMW01000001
EMBL· GenBank· DDBJ
ESS15290.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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