V4L653 · V4L653_EUTSA
- ProteinRRM domain-containing protein
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids494 (go to sequence)
- Protein existencePredicted
- Annotation score3/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | nucleus | |
Molecular Function | chromatin binding | |
Molecular Function | mRNA binding | |
Molecular Function | sequence-specific DNA binding | |
Biological Process | cellular response to jasmonic acid stimulus | |
Biological Process | defense response to bacterium | |
Biological Process | defense response to fungus | |
Biological Process | epigenetic regulation of gene expression | |
Biological Process | innate immune response | |
Biological Process | negative regulation of innate immune response | |
Biological Process | positive regulation of DNA-templated transcription | |
Biological Process | regulation of cell fate determination | |
Biological Process | regulation of flower development | |
Biological Process | regulation of glucosinolate biosynthetic process |
Keywords
- Molecular function
Names & Taxonomy
Protein names
- Recommended nameRRM domain-containing protein
Gene names
Organism names
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Eutremeae > Eutrema
Accessions
- Primary accessionV4L653
Proteomes
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for compositional bias, region, domain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 1-10 | Basic and acidic residues | |||
Region | 1-106 | Disordered | |||
Compositional bias | 11-46 | Acidic residues | |||
Compositional bias | 52-69 | Basic and acidic residues | |||
Compositional bias | 70-102 | Acidic residues | |||
Domain | 117-195 | RRM | |||
Domain | 197-279 | RRM | |||
Domain | 293-369 | RRM | |||
Region | 449-494 | Disordered | |||
Compositional bias | 477-486 | Basic and acidic residues | |||
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length494
- Mass (Da)54,997
- Last updated2014-01-22 v1
- MD5 Checksum2A5069A3C2610FE5AFE6D07287EE3FC9
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 1-10 | Basic and acidic residues | |||
Compositional bias | 11-46 | Acidic residues | |||
Compositional bias | 52-69 | Basic and acidic residues | |||
Compositional bias | 70-102 | Acidic residues | |||
Compositional bias | 477-486 | Basic and acidic residues | |||
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
KI517537 EMBL· GenBank· DDBJ | ESQ37787.1 EMBL· GenBank· DDBJ | Genomic DNA |