U6LDM4 · U6LDM4_9EIME

  • Protein
    SWIM-type domain-containing protein
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Predicted
  • Annotation score
    2/5

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentTRAMP complex
Molecular FunctionRNA binding
Molecular Functionzinc ion binding
Biological Processnuclear mRNA surveillance of mRNA 3'-end processing
Biological Processnuclear polyadenylation-dependent CUT catabolic process
Biological Processnuclear polyadenylation-dependent rRNA catabolic process
Biological Processnuclear polyadenylation-dependent snoRNA catabolic process
Biological Processnuclear polyadenylation-dependent snRNA catabolic process
Biological ProcessTRAMP-dependent tRNA surveillance pathway

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    SWIM-type domain-containing protein

Gene names

    • ORF names
      EBH_0015670

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • Houghton
  • Taxonomic lineage
    Eukaryota > Sar > Alveolata > Apicomplexa > Conoidasida > Coccidia > Eucoccidiorida > Eimeriorina > Eimeriidae > Eimeria

Accessions

  • Primary accession
    U6LDM4

Proteomes

Organism-specific databases

Subcellular Location

Family & Domains

Features

Showing features for domain, compositional bias, region.

TypeIDPosition(s)Description
Domain221-258SWIM-type
Compositional bias519-533Basic and acidic residues
Region519-562Disordered
Compositional bias534-562Polar residues
Region582-623Disordered
Compositional bias597-623Polar residues
Compositional bias711-761Polar residues
Region711-786Disordered

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    786
  • Mass (Da)
    78,709
  • Last updated
    2014-01-22 v1
  • Checksum
    2630E4D14F2ED0D1
MSQTSQQKICKKTQTNRKHTCPAYEGAVLAVLASAAATAAEAAAAAAPAAAAAAPAAALSSSELHRIWPILEREGKSIVANLQRHGGPPTGPLQGFIAPSLRGPPEETFLNRPKSDAIFISGGPPTSLPGALPKGPSTGLQGQLATGALRGAPTGGPQGGPLGAPCCIRLGVRWQQVVGRKALEVELLIPSASEKNHRHLVQLRFMQKQQQQQQQQQQQQQQQAVQHGQQDVVHSCCCGLHKSFGICQHVAALLLLLSFTDVSSDADSAAAAATVAAAAVGHPAPTATGPAAADSGAAASATATPTETAGSLATRSAAAAAAAAAAAAAVAAGSPSGSTLPPTQPLFCGSDKFSLSSSTDRISFSLLEAAAAATAATAAAAAPAAACLPLAAVAPAAAAEAQQNLFTLGAPAAAAGQGDVLQLPAAESAAAAAAGAAAAAAFSAAAQEADFDSAKEDVAAAASCLLPCDTSGYPRTSSTEPAAAAAAAAAAATAAATAGATAAVGAVATTGIETEGYGSDKCSADEIESDINDPKQQKSSSSISSNISSRRSSSSNSSNGSCSCSGLSLWSVLSRQHALGKAASTPIAHRRSSWLSKRDSSSSSGSNCSSNCSSNGSSSKKRRGSCSIFHEGLLFSPLACKHQPRKIRSRHSLTDLSRAPTEQQQQQQLLLLQQQQQQQGPEQQQQQQQQQQRAVASACCSNRRVSDSCQYSSRGMAQSSNSSSSSGSSSSSSSSSSTHTPNSSKPFAAVLTNSSSNELLPLLARLQGPSACTPGGPPVSKGRGAP

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias519-533Basic and acidic residues
Compositional bias534-562Polar residues
Compositional bias597-623Polar residues
Compositional bias711-761Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
HG710696
EMBL· GenBank· DDBJ
CDJ47343.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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