U4PBR8 · U4PBR8_CAEEL
- ProteinPDZ domain-containing protein
- Genepar-3
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids1300 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score1/5
Function
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineage
Accessions
- Primary accessionU4PBR8
Proteomes
Organism-specific databases
Expression
Gene expression databases
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-59 | Disordered | ||||
Sequence: MHNGRGGRYDVCPPPPPPPYHFNHVHTPPSKVIVQQQKQQQKAHREPPPSYPASKMTTT | ||||||
Compositional bias | 10-24 | Pro residues | ||||
Sequence: DVCPPPPPPPYHFNH | ||||||
Compositional bias | 29-44 | Polar residues | ||||
Sequence: PSKVIVQQQKQQQKAH | ||||||
Region | 129-256 | Disordered | ||||
Sequence: YNVGFARSNSRDFAPQPTHSKERRDSVVEVSSFDQIPQSGLRVSTPKPSRQSEDVIDGKPMNQPILRSSLRTEASGSRTEEATPVKQSRVTLSPEVEKKLAEQDERKSERRKHYDKNPGRFARGSDRK | ||||||
Compositional bias | 159-179 | Polar residues | ||||
Sequence: SSFDQIPQSGLRVSTPKPSRQ | ||||||
Compositional bias | 193-218 | Polar residues | ||||
Sequence: ILRSSLRTEASGSRTEEATPVKQSRV | ||||||
Compositional bias | 220-256 | Basic and acidic residues | ||||
Sequence: LSPEVEKKLAEQDERKSERRKHYDKNPGRFARGSDRK | ||||||
Domain | 302-379 | PDZ | ||||
Sequence: LVTFPPIPEKSENEKQLGIEVNAVFDESSELPGTSEPTKLSSVQIMKIEDGGRIAKDGRIRVGDCIVAIDGKPVDQMS | ||||||
Domain | 436-506 | PDZ | ||||
Sequence: VVELIKSSNGFGFTVTGRETAKGERLFYIGTVKPYGVALGHLKSGDRLLEINGTPTGQWTQSEIVEKLKET | ||||||
Domain | 580-671 | PDZ | ||||
Sequence: VIPFINGSSSAGLGVSLKARVSKKSNGSKVDCGIFIKNVMHGGAAFKEGGLRVDDRIVGVEDIDLEPLDNREAQAALAKKLKEVGMISSNVR | ||||||
Compositional bias | 688-743 | Polar residues | ||||
Sequence: DLSRITVDASSPSPSSRMSSHTAPDSLLPSPATRGTSSSGADSSHSRQSSASSAVP | ||||||
Region | 688-794 | Disordered | ||||
Sequence: DLSRITVDASSPSPSSRMSSHTAPDSLLPSPATRGTSSSGADSSHSRQSSASSAVPAVPARLTERDSIVSDGTSRNDESELPDSADPFNREGLGRKSLSEKRGMGAA | ||||||
Compositional bias | 755-785 | Basic and acidic residues | ||||
Sequence: IVSDGTSRNDESELPDSADPFNREGLGRKSL | ||||||
Compositional bias | 808-837 | Polar residues | ||||
Sequence: HQRQNSAPTSSTQKRSKSQPRSSSQRNYRS | ||||||
Region | 808-839 | Disordered | ||||
Sequence: HQRQNSAPTSSTQKRSKSQPRSSSQRNYRSPM | ||||||
Region | 870-1006 | Disordered | ||||
Sequence: QSMESINRPVESILRGTGQIPTGSSSKVQFMQAASPDQHPFPPGAALLRLKNEESRSRDKSRRKSMGNPFSAMRNFFGFGSKSRDASPEKTPTESVQLRSVERPKSIIDERNNGSSERAPPPLPPHQSQRRGSGGNV | ||||||
Compositional bias | 886-902 | Polar residues | ||||
Sequence: TGQIPTGSSSKVQFMQA | ||||||
Compositional bias | 920-934 | Basic and acidic residues | ||||
Sequence: KNEESRSRDKSRRKS | ||||||
Region | 1194-1222 | Disordered | ||||
Sequence: VEPVSGSSASATDRRGRSTSSGAVASGSS | ||||||
Compositional bias | 1196-1222 | Polar residues | ||||
Sequence: PVSGSSASATDRRGRSTSSGAVASGSS | ||||||
Region | 1271-1300 | Disordered | ||||
Sequence: AYETRGGGAGGSPSQYRRRDQGPPHRFPQY |
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,300
- Mass (Da)140,929
- Last updated2013-12-11 v1
- Checksum557EFEA588F84B74
Computationally mapped potential isoform sequences
There are 10 potential isoforms mapped to this entry
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 10-24 | Pro residues | ||||
Sequence: DVCPPPPPPPYHFNH | ||||||
Compositional bias | 29-44 | Polar residues | ||||
Sequence: PSKVIVQQQKQQQKAH | ||||||
Compositional bias | 159-179 | Polar residues | ||||
Sequence: SSFDQIPQSGLRVSTPKPSRQ | ||||||
Compositional bias | 193-218 | Polar residues | ||||
Sequence: ILRSSLRTEASGSRTEEATPVKQSRV | ||||||
Compositional bias | 220-256 | Basic and acidic residues | ||||
Sequence: LSPEVEKKLAEQDERKSERRKHYDKNPGRFARGSDRK | ||||||
Compositional bias | 688-743 | Polar residues | ||||
Sequence: DLSRITVDASSPSPSSRMSSHTAPDSLLPSPATRGTSSSGADSSHSRQSSASSAVP | ||||||
Compositional bias | 755-785 | Basic and acidic residues | ||||
Sequence: IVSDGTSRNDESELPDSADPFNREGLGRKSL | ||||||
Compositional bias | 808-837 | Polar residues | ||||
Sequence: HQRQNSAPTSSTQKRSKSQPRSSSQRNYRS | ||||||
Compositional bias | 886-902 | Polar residues | ||||
Sequence: TGQIPTGSSSKVQFMQA | ||||||
Compositional bias | 920-934 | Basic and acidic residues | ||||
Sequence: KNEESRSRDKSRRKS | ||||||
Compositional bias | 1196-1222 | Polar residues | ||||
Sequence: PVSGSSASATDRRGRSTSSGAVASGSS |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
BX284603 EMBL· GenBank· DDBJ | CDH93173.1 EMBL· GenBank· DDBJ | Genomic DNA |