U2THC9 · U2THC9_STRPY

Function

function

Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Pathway

Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2.

Features

Showing features for active site.

TypeIDPosition(s)Description
Active site91Proton donor/acceptor
Active site153Schiff-base intermediate with acetaldehyde
Active site182Proton donor/acceptor

GO annotations

AspectTerm
Cellular Componentcytoplasm
Molecular Functiondeoxyribose-phosphate aldolase activity
Biological Process2-deoxyribose 1-phosphate catabolic process
Biological Processcarbohydrate catabolic process
Biological Processdeoxyribonucleotide catabolic process

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Deoxyribose-phosphate aldolase
  • EC number
  • Short names
    DERA
  • Alternative names
    • 2-deoxy-D-ribose 5-phosphate aldolase
    • Phosphodeoxyriboaldolase
      (Deoxyriboaldolase
      )

Gene names

    • Name
      deoC
    • ORF names
      HMPREF1231_1969

Organism names

Accessions

  • Primary accession
    U2THC9

Proteomes

Subcellular Location

Keywords

Family & Domains

Sequence similarities

Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    223
  • Mass (Da)
    24,004
  • Last updated
    2013-11-13 v1
  • Checksum
    5F68852D5273F5BE
MEVKDILKTVDHTLLATTATWPEIQTILDDAMAYETASACIPASYVKKAAEYVSGKLAICTVIGFPNGYSTTAAKVFECEDAIQNGADEIDMVINLTDVKNGDFDTVEEEIRQIKAKCQDHILKVIVETCQLTKEELIELCGVVTRSGADFIKTSTGFSTAGATFEDVEVMAKYVGEGVKIKAAGGISSLEDAKTFIALGASRLGTSRIIKIVKNEATKPDSY

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AWPJ01000316
EMBL· GenBank· DDBJ
ERL12464.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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