T0R4B9 · T0R4B9_SAPDV

Function

Catalytic activity

Cofactor

Zn2+ (UniProtKB | Rhea| CHEBI:29105 )

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcondensed nuclear chromosome
Cellular ComponentMre11 complex
Molecular FunctionATP hydrolysis activity
Molecular Functiondouble-stranded telomeric DNA binding
Molecular FunctionG-quadruplex DNA binding
Molecular Functionmetal ion binding
Molecular Functionsingle-stranded telomeric DNA binding
Biological Processchromosome organization involved in meiotic cell cycle
Biological ProcessDNA duplex unwinding
Biological Processdouble-strand break repair
Biological Processtelomere maintenance via recombination
Biological Processtelomere maintenance via telomerase

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Rad50/SbcC-type AAA domain-containing protein

Gene names

    • ORF names
      SDRG_01171

Organism names

Accessions

  • Primary accession
    T0R4B9

Proteomes

Organism-specific databases

Subcellular Location

Keywords

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for domain, coiled coil, region, compositional bias.

Type
IDPosition(s)Description
Domain6-248Rad50/SbcC-type AAA
Coiled coil203-247
Coiled coil315-345
Coiled coil394-421
Coiled coil584-618
Coiled coil846-939
Region955-975Disordered
Compositional bias958-975Basic and acidic residues
Coiled coil1038-1085

Sequence similarities

Belongs to the SMC family. RAD50 subfamily.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,339
  • Mass (Da)
    151,383
  • Last updated
    2013-10-16 v1
  • Checksum
    F84602B2797A28B8
MSSIEKLSICGIRSFYPGRAESIEFNQPLTVILGANGCGKTTIIECLKISCTGSLPPSARSGQSFIHDPKIRGDVEVKANIRLRFKSRAGQTMVVQRTFRLQQMKSTCKYQALDGVVRMLDKHGKKLSINQKCGELDKHIPDLLGVSAAVLESVIFCHQEESNWPLQEGIVLKKRFDDIFESARYTKALDAIKKLKKDRVGIAKDMKRDLDVLAEQVSRVREMEEQLEEQQAKLESLQADYAQLSSDIDLRETRVHETEAALGHVRSVLDQLRAQEAVVKQKSDEITRVYQQMGREMAESTESLEEILANYDSILAIKRKEVQDLSTQESQLQDELASVDQAERKLAHEKGVLEATMAQQKEAMRARTDLATKLGSTYGIAAAVVTQDDARIFASRLQDVLAQLGATLKRLEADARRGDDEWNAKQTTVSAKVHHCHETLGAKTRELSALKRKEDALVAELNTSSGGLDASQREWGVVEARLADAEAKLSALRESATTATLKEDILALEKEANSITFDLRALDDKLQILRTFERDQIALEHKRNEHTAKRKALETALASSQNVLESPLSFATLSDDRNRVETLVFELKRSRETSSANVAKLEREMAEAQVKKRTDEGAIAKTRTRYETLSNGPMLEWKTLLATFGLQPETALTQLEAQYLDAKDKTQSRKNTIVFLRTYMKKGEKDHCCPLCQRGLSPDEETLFSQLIANKMDDSKNQEKIAKAERNESAALDAWKRCEKLQPLYTEFAALEASLPTKTTELESLYTTIRMLDVQLQEAKATHAANVTRSDDAAAALKQLTSLQTQWEELSFVGHRLDGDDDHLLSEKTIRLGANPPTLVEAQAARDAKQTGLQDSQSRLKRLQRELQLHQETQQGLQNEVHKCREEKAAIQQRRVDVEKAREAREGLRVHIKALQDEVATLQRDLPGYQRELQQCKNEQLLARDTHQRAIATAREASSRCENDKRQYDDKSKHADQFARQNLDGRALELTSQMQSLQAMKAEKARRVEQIQPEKSSALRALDENVSLKRQIDDNLSYRRLQAELQQAKAAVLATQRQLGQLPSVAEAERLVADAKNQCDATREERAVFRGKQEALQEAIRNVQLKLHGRDLKNIDEKQRCKLIDYETTMMAVSDLDKYYKALDLSLMEFHSKKIEEINAIIRTLWQITYRGNDIDTIELVSGQESGAAARAGRSYNYRVVMRKDNTLLDMRGRCSAGQKVLAALVIRLALAETFCLNCGILALDEPTTNLDSANKLGLAQAIADILKARENQHNFQLICITHDEEFVQMLNRSQLMGGTRPEYFWTVSREEILPRYYCSKIEKRNWNSDVIYRPNDDI

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias958-975Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JH767134
EMBL· GenBank· DDBJ
EQC41195.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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