S6BD07 · S6BD07_9GAMM
- ProteinDNA polymerase III subunit epsilon
- GenednaQ
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids242 (go to sequence)
- Protein existencePredicted
- Annotation score2/5
Function
function
DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease.
Catalytic activity
- DNA(n) + a 2'-deoxyribonucleoside 5'-triphosphate = DNA(n+1) + diphosphate
Cofactor
Protein has several cofactor binding sites:
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | cytosol | |
Molecular Function | 3'-5' exonuclease activity | |
Molecular Function | DNA binding | |
Molecular Function | DNA-directed DNA polymerase activity | |
Molecular Function | metal ion binding | |
Biological Process | DNA replication proofreading |
Keywords
- Molecular function
- Biological process
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameDNA polymerase III subunit epsilon
- EC number
Gene names
Organism names
- Strain
- Taxonomic lineageBacteria > Pseudomonadota > Gammaproteobacteria
Accessions
- Primary accessionS6BD07
Proteomes
Subcellular Location
UniProt Annotation
GO Annotation
Interaction
Subunit
DNA polymerase III contains a core (composed of alpha, epsilon and theta chains) that associates with a tau subunit. This core dimerizes to form the POLIII' complex. PolIII' associates with the gamma complex (composed of gamma, delta, delta', psi and chi chains) and with the beta chain to form the complete DNA polymerase III complex.
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for domain, region.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 7-179 | Exonuclease | ||||
Sequence: RQIVLDTETTGLEPAQGHRIIEIGCVELIDRRLTGNNFHVYLQPDREIDAGAVEVHGITNEFLADKPRFADIAEEFIAYLRGAEVIIHNAPFDVGFIDAEFARLPEGPRMAELCEITDTLVMAREMHPGQRNSLDALCGRYDIDNAHRTKHGALLDAEILADVYLAMTGGQKT | ||||||
Region | 180-206 | Disordered | ||||
Sequence: LSLEGEEDGESSEGEASGIRRLPADRP |
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length242
- Mass (Da)26,608
- Last updated2013-10-16 v1
- Checksum6F48609ABAAD68E1
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AP012978 EMBL· GenBank· DDBJ | BAN69243.1 EMBL· GenBank· DDBJ | Genomic DNA |