S4WUL1 · SPL15_ARAAL

Function

function

Probable transcription factor required for the flowering response to vernalization in the shoot apical meristem (SAM) (PubMed:30679374).
Defines the competence of shoot meristems to flower in response to vernalization in perennials (PubMed:30679374).

Features

Showing features for binding site.

135550100150200250300350
TypeIDPosition(s)Description
Binding site64Zn2+ 1 (UniProtKB | ChEBI)
Binding site69Zn2+ 1 (UniProtKB | ChEBI)
Binding site86Zn2+ 1 (UniProtKB | ChEBI)
Binding site89Zn2+ 1 (UniProtKB | ChEBI)
Binding site105Zn2+ 2 (UniProtKB | ChEBI)
Binding site108Zn2+ 2 (UniProtKB | ChEBI)
Binding site112Zn2+ 2 (UniProtKB | ChEBI)
Binding site124Zn2+ 2 (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA binding
Molecular Functionmetal ion binding
Biological Processanther development
Biological Processpositive regulation of vernalization response
Biological Processregulation of cell population proliferation
Biological Processregulation of cell size

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Squamosa promoter-binding protein-like 15
  • Short names
    AaSPL15

Gene names

    • Name
      SPL15
    • Ordered locus names
      AALP_Aa5g233200

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Pajares
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Arabideae > Arabis

Accessions

  • Primary accession
    S4WUL1

Proteomes

Genome annotation databases

Subcellular Location

Keywords

Phenotypes & Variants

Disruption phenotype

Spl15 mutant plants fail to flower after vernalization.

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00004474421-355Squamosa promoter-binding protein-like 15

Expression

Induction

Induced in the shoot apical meristem (SAM) during vernalization.

Structure

Family & Domains

Features

Showing features for region, compositional bias, zinc finger, motif.

TypeIDPosition(s)Description
Region1-27Disordered
Compositional bias7-27Polar residues
Zinc finger61-138SBP-type
Motif121-137Bipartite nuclear localization signal

Domain

The SBP-type zinc finger is required for the binding to DNA.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    355
  • Mass (Da)
    39,410
  • Last updated
    2013-10-16 v1
  • Checksum
    A0AC6E7CE25E9771
MELLKGSGLNQTESGGSSSTESSSLSGGLRFGQKIYFEDGSGSGSGSSKNRVHNTGRKSLTARCQVEGCRMDLTNAKSYYSRHKVCCIHSKSSKVIVSGLPQRFCQQCSRFHLLSEFDLEKRSCRRRLACHNERRRKPQATTSLLSSRYARTAPSLYGNANSAMIRSVLGDPTAWATARSAMRWSGPERESHQVMNVFSSHGSSSFTTTCPEMMMNNNGTDSSCALSLLSNTNPNQQLQQHQLQTPTNVWRPSSGFNPVIADRVTMAQPPPVSIHNQYLNNQTWEFTTGEKSNLQYMSPVLGPSQISQPADFQISNGSTMGGFELSHHQQVLRQYMEPENTRAYDSSPQHFNWSL

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias7-27Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
KC815962
EMBL· GenBank· DDBJ
AGP03038.1
EMBL· GenBank· DDBJ
Genomic DNA
CM002873
EMBL· GenBank· DDBJ
KFK35084.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

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