Q9ZV45 · Q9ZV45_ARATH
- ProteinSmall nuclear ribonucleoprotein E
- GenePCP
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids
- Protein existenceEvidence at protein level
- Annotation score3/5
Function
function
Plays a role in pre-mRNA splicing as a core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | spliceosomal complex | |
Cellular Component | U1 snRNP | |
Cellular Component | U2 snRNP | |
Cellular Component | U4 snRNP | |
Cellular Component | U4/U6 x U5 tri-snRNP complex | |
Cellular Component | U5 snRNP | |
Molecular Function | RNA binding | |
Biological Process | regulation of meristem development | |
Biological Process | regulation of RNA splicing | |
Biological Process | RNA splicing | |
Biological Process | spliceosomal snRNP assembly |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Recommended nameSmall nuclear ribonucleoprotein E
- Short namessnRNP-E
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9ZV45
Proteomes
Organism-specific databases
Genome annotation databases
PTM/Processing
Proteomic databases
Expression
Gene expression databases
Structure
Sequence
- Sequence statusComplete
- Length88
- Mass (Da)10,298
- Last updated1999-05-01 v1
- Checksum762719DD9FDF35C5
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A8MRL6 | A8MRL6_ARATH | PCP | 78 |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AC005724 EMBL· GenBank· DDBJ | AAD08943.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AY086369 EMBL· GenBank· DDBJ | AAM64436.1 EMBL· GenBank· DDBJ | mRNA | ||
BT005662 EMBL· GenBank· DDBJ | AAO64082.1 EMBL· GenBank· DDBJ | mRNA | ||
CP002685 EMBL· GenBank· DDBJ | AEC06800.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AK118809 EMBL· GenBank· DDBJ | BAC43399.1 EMBL· GenBank· DDBJ | mRNA |