Q9XE33 · NFYC6_ORYSJ

Function

function

Component of the NF-Y/HAP transcription factor complex.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Cellular Componentnucleus
Molecular FunctionDNA binding
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular Functionprotein heterodimerization activity
Biological Processregulation of transcription by RNA polymerase II

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Nuclear transcription factor Y subunit C-6
  • Short names
    OsNF-YC6
  • Alternative names
    • Transcriptional activator HAP5D
      (OsHAP5D
      )

Gene names

    • Name
      NFYC6
    • Synonyms
      HAP5D
    • ORF names
      B1142B04.32
      , P0026F07.3
    • Ordered locus names
      Os08g0496500
      , LOC_Os08g38780

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q9XE33

Proteomes

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00004374361-205Nuclear transcription factor Y subunit C-6

Proteomic databases

Interaction

Subunit

Heterotrimeric transcription factor composed of three components, NF-YA, NF-YB and NF-YC. NF-YB and NF-YC must interact and dimerize for NF-YA association and DNA binding (By similarity).
Interacts with NFYB2 (PubMed:18193457).
Interacts with NFYB8, NFYB10 and HD5/NFYB11 (PubMed:26542958).

Protein-protein interaction databases

Family & Domains

Features

Showing features for region.

TypeIDPosition(s)Description
Region1-24Disordered

Sequence similarities

Belongs to the NFYC/HAP5 subunit family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    205
  • Mass (Da)
    21,909
  • Last updated
    1999-11-01 v1
  • Checksum
    F747D35F886B59C8
MEPKSTTPPPPPPPPVLGAPVPYPPAGAYPPPVGPYAHAPPLYAPPPPAAAAASAAATAASQQAAAAQLQNFWAEQYREIEHTTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFDFLVDIVPRDEAKDAEAAAAVAAGIPHPAAGLPATDPMAYYYVQPQ

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AB288044
EMBL· GenBank· DDBJ
BAF64452.1
EMBL· GenBank· DDBJ
Genomic DNA
AP000364
EMBL· GenBank· DDBJ
BAA81759.1
EMBL· GenBank· DDBJ
Genomic DNA
AP005148
EMBL· GenBank· DDBJ
BAD10129.1
EMBL· GenBank· DDBJ
Genomic DNA
AP008214
EMBL· GenBank· DDBJ
BAF24050.1
EMBL· GenBank· DDBJ
Genomic DNA
AP014964
EMBL· GenBank· DDBJ
BAT06066.1
EMBL· GenBank· DDBJ
Genomic DNA
AK108510
EMBL· GenBank· DDBJ
BAG98424.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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