Q9W4E2 · NBEA_DROME
- ProteinNeurobeachin
- Generg
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids3466 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways. Required for associative odor learning and short-term memory. Involved in development of the neuromuscular junction and the mushroom body.
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | cytosol | |
Cellular Component | membrane | |
Cellular Component | neuronal cell body | |
Cellular Component | perikaryon | |
Molecular Function | protein kinase A binding | |
Molecular Function | protein kinase binding | |
Biological Process | compound eye cone cell differentiation | |
Biological Process | eye photoreceptor cell development | |
Biological Process | mushroom body development | |
Biological Process | neuromuscular junction development | |
Biological Process | olfactory learning | |
Biological Process | protein localization | |
Biological Process | short-term memory |
Names & Taxonomy
Protein names
- Recommended nameNeurobeachin
- Alternative names
Gene names
Organism names
- Strains
- Taxonomic lineageEukaryota > Metazoa > Ecdysozoa > Arthropoda > Hexapoda > Insecta > Pterygota > Neoptera > Endopterygota > Diptera > Brachycera > Muscomorpha > Ephydroidea > Drosophilidae > Drosophila > Sophophora
Accessions
- Primary accessionQ9W4E2
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Membrane ; Peripheral membrane protein
Note: Found in the cortical region of perikarya with no expression in neuropil regions. Located at or near the Golgi network in perikarya of the dorsal medial cluster neurons.
Keywords
- Cellular component
Phenotypes & Variants
Disruption phenotype
Mutants are viable and fertile but display a rough eye surface phenotype, impaired short-term memory, aberrant associative odor learning, aberrant neuromuscular junction morphology with increased numbers of synaptic boutons, and defective axonal morphology of the Kenyon cells, the neurons of the mushroom body.
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000051093 | 1-3466 | Neurobeachin | |||
Sequence: MADIMRPPYSEIKRPDEIVRMTTADNLKFAVLIGLIEVGQVTNREVVNTVLHLLVGGEFDMELNFVIQDAQNIKHMLELLDHCPPNLQAEIWSVFIAILRKSVRNLQACTDVGLIEHVLVRLQRSETVVADLLIEMLGVLASYSITVKELKLLFGTMKATNGKWPRHSAKLLNVLRQMPHRNGPDVFFSFPGRKGSAMVLPPLAKWPYENGFTFTTWFRLDPINSVNIEREKPYLYCFKTSKGVGYTAHFVGNCLVLTSMKVKGKGFQHCVKYEFQPRKWYMIAIVYIYNRWTKSEIKCLVNGQLASSTEMAWFVSTNDPFDKCYIGATPELDEERVFCGQMSAIYLFSEALTTQQICAMHRLGPGYKSQFRFDNECYLNLPDNHKRVSHFQLLPATLGASALSGGSGSGTGSGTGNDASAAAAAAVAAGQQQQLQLQFQILAAEQEARAIDWSDEKLDLNAAFVKIRAVLTARNAVTLAGSSSTGTTAVATAAAAAAAAGAGAGTTAAATSAAAAAAATQNENDAAVGQQQHATHHHATAATGSADDPLGHLPTGNASSSSSSFEQLRRMSSVSSLNSMVGSADTEEVNQLKAVLYDGKLSNAIVFMYNPVATDGQLCLQSSPKGNVSYFVHTPHALMLQDVKAVVTHSIHCTLNSIGGIQVLFPLFSQLDMAHEGLGDIKRDPTLCSKLLGFICELVETSQTVQQHMIQNRGFLVISFMLQRSSREHLTLEVLGSFLNLTKYLVTCLSANSDLLLKQLFCFSFLTWQLLDHVLFNPALWIYTPANVQARLYSYLATEFLSDTQIYSNVRRVSTVLQTVHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIGNGVKEDELQSILNYLTTMHEDENLHDVLQMLISLMSEHPSSMVPAFDVKHGVRSIFKLLAAESQLIRLQALKLLGFFLSRSTHKRKYDVMSPHNLYTLLAERLLLYEESLSLPTYNVLYEIMTEHISQQILYTRHPEPESHYRLENPMILKVVATLIRQSKQTESLIDVKKLFLQDMTLLCNSNRENRRTVLQMSVWQEWLIAMAYIHPKSSEEQKISDMVYSLFRMLLHHAIKHEYGGWRVWVDTLAIVHSKVSYEEFKLQFAQMYEHYERQRTDNITDPALRQARPISTISGWEREELHQQQNGGSAAAVATNQTAAVKGSVSIASLEDVPPVVEEEVEELELEEVEIQEGPITEETEQKSVIANISDVYNEQLKTDATCNGNLEDVKEEEPVQQQIGDLEKQPEPSTPLGALRETLQLGDDMDVEELELATAKDALNAEQHVSRVLQASEAALNDCKMAVDDVLQESSSVLKDEEIELAVNEVVQGVLNNEKKTQSQDNKDNKEQPGEQDVNVSLLNSKNLLNNNNNNNNNSPSPTPTTATATAETEAETEVNANEIVSSTEAPKAETETSVAPEVETPETAKPSPIVPSPVLATNQKTEDAANKLNNNEKLAEISASPEPPIVVETPEADLLQLSDSETKPNKETEAEDSVALAVRDIVEQLIDKVIDATEAESASETKTETNNNEIPKKEKQTSEEPEDVETAETLAAAAKEIVQEVVEAALVMVQEESTQEKPEKGANSEEEKNEIGKEEILLQLEEKPASTEVQETKIEGDLKKPEDPKGHSSVEPKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQVVAIVNQVLDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTTQTTPKNEAGSSLLVEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANSSQLDANHYGPGNPESKQQQQRSKSGSTRPMFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQVWRSHSTKSVLDFVNSSENAIFVVNTVHLISQLADNLIIACGGLLPLLASATSPNSELDVLEPTQGMPLEVAVSFLQRLVNMADVLIFATSLNFGELEAEKNMSSGGILRQCLRLVCTCAVRNCLECKERTRYNVGALARDVPGAAHLQALIRGAQASPKNIVESITGQLSPVKDPEKLLQDMDVNRLRAVIYRDVEETKQAQFLSLAIVYFISVLMVSKYRDILEPPAEPQIQRQSPVLQRTAGGGGRQIQDSDYEIIVVDENNPSVLADNDSHSSGPPSIKANQTTTIATTTTTTATTHINNNNTKTTTSNAPTATIKIQQQPLSPPKPLVPQKLPKSVDSDVGSLNMNSTENEVPEVESSSEILIDDHKPSHSNDESWTDVNLNEDAAVQAASAGIVVGLVDNRGNVISDKHDPSHHNQQQQQQAGIIGQQQQHGSLGHSERGDKPDSEISVVRVPDGYGGAGSGGGVNSGQGQGVPSNQRPRPEELPMKAPALVAQLPLTTPSREASLTQKLEIALGPVCPLLREIMVDFAPFLSKTLVGSHGQELLMEGKGLTTFKNSHSVVELVMLLCSQEWQNSLQKHAGLAFIELINEGRLLSHAMKDHIVRVANEAEFILNRMRADDVLKHADFESQCAQTLLERREEERMCDHLITAARRRDNVIASRLLEKVRNIMCNRHGAWGDSSSTSSGGAIVGAVQKSPYWKLDAWEDDARRRKRMVQNPRGSSHPQATLKAALENGGPEDAILQTRDEFHTQIAVSRTHPSGQHNGELLDDAELLIEDRELDLDLTGPVNISTKARLIAPGLVAPGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDHLHGKWYFSEVRAIFSRRYLLQNVALEIFLASRTSILFAFPDQHTVKKVIKALPRVGVGIKYGIPQTRRASMMSPRQLMRNSNMTQKWQRREISNFEYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDSDTIPPFHYGTHYSTAAFTLNWLVRVEPFTTMFLALQGGKFDYPDRLFSSVSLSWKNCQRDTSDVKELIPEWYFLPEMFYNSSGYRLGHREDGALVDDIELPPWAKSPEEFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDGVLDPVMREAVENQIRNFGQTPSQLLMEPHPPRSSAMHLSPMMFSAMPEDLCQMLKFYQNSPVIHISANTYPQLSLPSVVTVTAGHQFAVNRWNCNYTASVQSPSYAESPQSPGSNQPLTIDPVLAVHGTNNNSNAASRRHLGDNFSQMLKIRSNCFVTTVDSRFLIACGFWDNSFRVFATETAKIVQIVFGHFGVVTCMARSECNITSDCYIASGSADCTVLLWHWNARTQSIVGEGDVPTPRATLTGHEQAVTSVVISAELGLVVSGSSNGPVLIHTTFGDLLRSLDPPAEFHSPELITMSREGFIVINYDKGNVAAYTINGKKLRHETHNDNLQCMLLSRDGEYLMTAGDRGIVEVWRTFNLAPLYAFPACNAGIRSLALTHDQKYLLAGLSTGSIIVFHIDFNRWHHEYQQRY |
Proteomic databases
Expression
Tissue specificity
In early embryos, ubiquitous expression with elevated levels in ventral furrow and flanking mesectodermal cells, neuroblasts and mesoderm. Late embryos show reduced expression in epidermis and skeletal muscle and elevated in nervous system, gut endothelium, tracheal system and salivary gland. Larvae show expression in imaginal disks and many neural cells. Developing eye imaginal disk shows expression throughout the disk and in the region of the morphogenetic furrow. Ubiquitous expression in adults with higher levels in head region. Expressed in larval neurons but not in larval glia.
Developmental stage
All stages of development.
Gene expression databases
Family & Domains
Features
Showing features for compositional bias, region, repeat, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 523-539 | Polar residues | ||||
Sequence: ENDAAVGQQQHATHHHA | ||||||
Region | 523-565 | Disordered | ||||
Sequence: ENDAAVGQQQHATHHHATAATGSADDPLGHLPTGNASSSSSSF | ||||||
Region | 1363-1382 | Disordered | ||||
Sequence: NNEKKTQSQDNKDNKEQPGE | ||||||
Compositional bias | 1393-1441 | Polar residues | ||||
Sequence: KNLLNNNNNNNNNSPSPTPTTATATAETEAETEVNANEIVSSTEAPKAE | ||||||
Region | 1393-1465 | Disordered | ||||
Sequence: KNLLNNNNNNNNNSPSPTPTTATATAETEAETEVNANEIVSSTEAPKAETETSVAPEVETPETAKPSPIVPSP | ||||||
Region | 1545-1583 | Disordered | ||||
Sequence: TEAESASETKTETNNNEIPKKEKQTSEEPEDVETAETLA | ||||||
Compositional bias | 1558-1574 | Basic and acidic residues | ||||
Sequence: NNNEIPKKEKQTSEEPE | ||||||
Region | 1601-1695 | Disordered | ||||
Sequence: VQEESTQEKPEKGANSEEEKNEIGKEEILLQLEEKPASTEVQETKIEGDLKKPEDPKGHSSVEPKTPNLEEPKPQETEQQKSQEVAEELPQKPEE | ||||||
Compositional bias | 1605-1691 | Basic and acidic residues | ||||
Sequence: STQEKPEKGANSEEEKNEIGKEEILLQLEEKPASTEVQETKIEGDLKKPEDPKGHSSVEPKTPNLEEPKPQETEQQKSQEVAEELPQ | ||||||
Compositional bias | 1716-1739 | Polar residues | ||||
Sequence: VAAEQTTQTSPAPEEQSPQILAME | ||||||
Region | 1716-1767 | Disordered | ||||
Sequence: VAAEQTTQTSPAPEEQSPQILAMESPATSVRVKPTEVDSTTQTTPKNEAGSS | ||||||
Compositional bias | 1747-1767 | Polar residues | ||||
Sequence: VKPTEVDSTTQTTPKNEAGSS | ||||||
Compositional bias | 1794-1840 | Polar residues | ||||
Sequence: DYSNQQAAAAVENANSSQLDANHYGPGNPESKQQQQRSKSGSTRPMF | ||||||
Region | 1794-1848 | Disordered | ||||
Sequence: DYSNQQAAAAVENANSSQLDANHYGPGNPESKQQQQRSKSGSTRPMFSPGPTRPP | ||||||
Repeat | 1846-1888 | WD 1 | ||||
Sequence: RPPFRIPEFKWSYIHQRLLSDVLFSLETDIQVWRSHSTKSVLD | ||||||
Region | 2105-2130 | Disordered | ||||
Sequence: AEPQIQRQSPVLQRTAGGGGRQIQDS | ||||||
Region | 2198-2257 | Disordered | ||||
Sequence: QQQPLSPPKPLVPQKLPKSVDSDVGSLNMNSTENEVPEVESSSEILIDDHKPSHSNDESW | ||||||
Compositional bias | 2218-2236 | Polar residues | ||||
Sequence: DSDVGSLNMNSTENEVPEV | ||||||
Compositional bias | 2240-2254 | Basic and acidic residues | ||||
Sequence: SEILIDDHKPSHSND | ||||||
Region | 2284-2365 | Disordered | ||||
Sequence: GNVISDKHDPSHHNQQQQQQAGIIGQQQQHGSLGHSERGDKPDSEISVVRVPDGYGGAGSGGGVNSGQGQGVPSNQRPRPEE | ||||||
Compositional bias | 2297-2316 | Polar residues | ||||
Sequence: NQQQQQQAGIIGQQQQHGSL | ||||||
Domain | 2666-2774 | BEACH-type PH | ||||
Sequence: DLTGPVNISTKARLIAPGLVAPGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDHLHGKWYFSEVRAIFSRRYLLQNVALEIFLASRTSILFAFPDQHTVKKVIKALP | ||||||
Domain | 2793-3082 | BEACH | ||||
Sequence: MSPRQLMRNSNMTQKWQRREISNFEYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDSDTIPPFHYGTHYSTAAFTLNWLVRVEPFTTMFLALQGGKFDYPDRLFSSVSLSWKNCQRDTSDVKELIPEWYFLPEMFYNSSGYRLGHREDGALVDDIELPPWAKSPEEFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDGVLDPVMREAVENQIRNFGQTPSQLLMEPHPPR | ||||||
Repeat | 3241-3284 | WD 2 | ||||
Sequence: GHFGVVTCMARSECNITSDCYIASGSADCTVLLWHWNARTQSIV | ||||||
Repeat | 3298-3338 | WD 3 | ||||
Sequence: GHEQAVTSVVISAELGLVVSGSSNGPVLIHTTFGDLLRSLD | ||||||
Repeat | 3380-3419 | WD 4 | ||||
Sequence: THNDNLQCMLLSRDGEYLMTAGDRGIVEVWRTFNLAPLYA | ||||||
Repeat | 3422-3461 | WD 5 | ||||
Sequence: ACNAGIRSLALTHDQKYLLAGLSTGSIIVFHIDFNRWHHE |
Domain
RII-alpha binding site, predicted to form an amphipathic helix, could participate in protein-protein interactions with a complementary surface on the R-subunit dimer.
Sequence similarities
Belongs to the WD repeat neurobeachin family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence & Isoform
- Sequence statusComplete
This entry describes 2 isoforms produced by Alternative splicing.
Q9W4E2-5
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- NameN
- Length3,466
- Mass (Da)384,513
- Last updated2016-03-16 v4
- Checksum152AEB5152C8F37C
Q9W4E2-6
- NameR
- Differences from canonical
- 2-53: ADIMRPPYSEIKRPDEIVRMTTADNLKFAVLIGLIEVGQVTNREVVNTVLHL → DSLERLMRAAPLPRMLTSGVVATAAAAASAAAGKGMVSVGGGATAIAAGGGQQRALVHASLAAATVGRKGRHLTGTFCLTGDTMEGIIQCLVFLKAFS
- 388-594: Missing
- 759-768: Missing
- 2159-2214: Missing
Computationally mapped potential isoform sequences
There are 5 potential isoforms mapped to this entry
Sequence caution
Features
Showing features for alternative sequence, sequence conflict, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Alternative sequence | VSP_058161 | 2-53 | in isoform R | |||
Sequence: ADIMRPPYSEIKRPDEIVRMTTADNLKFAVLIGLIEVGQVTNREVVNTVLHL → DSLERLMRAAPLPRMLTSGVVATAAAAASAAAGKGMVSVGGGATAIAAGGGQQRALVHASLAAATVGRKGRHLTGTFCLTGDTMEGIIQCLVFLKAFS | ||||||
Sequence conflict | 218 | in Ref. 3; CAC18799/CAC18800 and 4; AAB83959 | ||||
Sequence: F → C | ||||||
Sequence conflict | 237 | in Ref. 3; CAC18799/CAC18800 and 4; AAB83959 | ||||
Sequence: C → S | ||||||
Alternative sequence | VSP_058162 | 388-594 | in isoform R | |||
Sequence: Missing | ||||||
Sequence conflict | 411 | in Ref. 3; CAC18799 and 4; AAB83959 | ||||
Sequence: T → A | ||||||
Sequence conflict | 415 | in Ref. 3; CAC18799 and 4; AAB83959 | ||||
Sequence: T → S | ||||||
Compositional bias | 523-539 | Polar residues | ||||
Sequence: ENDAAVGQQQHATHHHA | ||||||
Sequence conflict | 552 | in Ref. 3; CAC18799 and 4; AAB83959 | ||||
Sequence: H → D | ||||||
Sequence conflict | 590 | in Ref. 3; CAC18799 and 4; AAB83959 | ||||
Sequence: N → D | ||||||
Alternative sequence | VSP_058163 | 759-768 | in isoform R | |||
Sequence: Missing | ||||||
Compositional bias | 1393-1441 | Polar residues | ||||
Sequence: KNLLNNNNNNNNNSPSPTPTTATATAETEAETEVNANEIVSSTEAPKAE | ||||||
Compositional bias | 1558-1574 | Basic and acidic residues | ||||
Sequence: NNNEIPKKEKQTSEEPE | ||||||
Compositional bias | 1605-1691 | Basic and acidic residues | ||||
Sequence: STQEKPEKGANSEEEKNEIGKEEILLQLEEKPASTEVQETKIEGDLKKPEDPKGHSSVEPKTPNLEEPKPQETEQQKSQEVAEELPQ | ||||||
Sequence conflict | 1702 | in Ref. 3; CAC18799/CAC18800 and 4; AAB83959 | ||||
Sequence: N → T | ||||||
Compositional bias | 1716-1739 | Polar residues | ||||
Sequence: VAAEQTTQTSPAPEEQSPQILAME | ||||||
Compositional bias | 1747-1767 | Polar residues | ||||
Sequence: VKPTEVDSTTQTTPKNEAGSS | ||||||
Compositional bias | 1794-1840 | Polar residues | ||||
Sequence: DYSNQQAAAAVENANSSQLDANHYGPGNPESKQQQQRSKSGSTRPMF | ||||||
Alternative sequence | VSP_058164 | 2159-2214 | in isoform R | |||
Sequence: Missing | ||||||
Compositional bias | 2218-2236 | Polar residues | ||||
Sequence: DSDVGSLNMNSTENEVPEV | ||||||
Sequence conflict | 2230-2239 | in Ref. 3; CAC18799/CAC18800 and 4; AAB83959 | ||||
Sequence: ENEVPEVESS → GKTKCPRWSHP | ||||||
Compositional bias | 2240-2254 | Basic and acidic residues | ||||
Sequence: SEILIDDHKPSHSND | ||||||
Compositional bias | 2297-2316 | Polar residues | ||||
Sequence: NQQQQQQAGIIGQQQQHGSL | ||||||
Sequence conflict | 2576 | in Ref. 3; CAC18799/CAC18800 | ||||
Sequence: V → G |
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AE014298 EMBL· GenBank· DDBJ | AAF46011.4 EMBL· GenBank· DDBJ | Genomic DNA | ||
AE014298 EMBL· GenBank· DDBJ | AAN09135.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
Y18278 EMBL· GenBank· DDBJ | CAC18799.1 EMBL· GenBank· DDBJ | mRNA | Sequence problems. | |
Y18278 EMBL· GenBank· DDBJ | CAC18800.1 EMBL· GenBank· DDBJ | mRNA | Sequence problems. | |
AF003622 EMBL· GenBank· DDBJ | AAB83959.1 EMBL· GenBank· DDBJ | mRNA | Sequence problems. | |
AY051596 EMBL· GenBank· DDBJ | AAK93020.1 EMBL· GenBank· DDBJ | mRNA | Different initiation |