Q9VP47 · TSR1_DROME

Function

function

Required during maturation of the 40S ribosomal subunit in the nucleolus.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleolus
Cellular Componentpreribosome, small subunit precursor
Molecular FunctionGTP binding
Molecular FunctionGTPase activity
Molecular FunctionU3 snoRNA binding
Biological Processendonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Pre-rRNA-processing protein TSR1 homolog
  • Alternative names
    • Tsr1 ribosome assembly factor

Gene names

    • Name
      Tsr1
    • ORF names
      CG7338

Organism names

  • Taxonomic identifier
  • Strain
    • Berkeley
  • Taxonomic lineage
    Eukaryota > Metazoa > Ecdysozoa > Arthropoda > Hexapoda > Insecta > Pterygota > Neoptera > Endopterygota > Diptera > Brachycera > Muscomorpha > Ephydroidea > Drosophilidae > Drosophila > Sophophora

Accessions

  • Primary accession
    Q9VP47
  • Secondary accessions
    • B5RIG8
    • Q86PD4
    • Q95TR7

Proteomes

Organism-specific databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain, modified residue.

Type
IDPosition(s)Description
ChainPRO_00003112801-814Pre-rRNA-processing protein TSR1 homolog
Modified residue444Phosphothreonine

Keywords

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region, domain, compositional bias.

Type
IDPosition(s)Description
Region1-67Disordered
Domain84-249Bms1-type G
Region316-357Disordered
Compositional bias317-341Basic and acidic residues
Region392-448Disordered
Compositional bias394-423Acidic residues
Compositional bias424-447Basic and acidic residues

Sequence similarities

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    814
  • Mass (Da)
    93,717
  • Last updated
    2000-05-01 v1
  • Checksum
    3C9299F0F65556A3
MADHAFHRPGPLKQANKAHKTGRHRSKGAIDNAQKGKIGLRPISHKHKQQQRKEQRRNQMNQLRKNKREEVLEQKRKLGGQNTAPFLVCLLPMHEQIDPMSALEILKSCDSELVVENSPSGIVYINLPRFKQRFAFVTPPVGRGNELIALDYLKVCDTTLLLTTAAFGDDEIFDRWGQRIFNMMSAQGIPTPVVALMDLESINPKRRPAAKQAAQKVISKLLPEEKIMQLDTASEALNVMRRIGGQKKRILHNVANRPHLFGDVVEFKPGSDPSDDLGTLEVTGFLRGQSLNVNGLVHIPGLGDFQLSQVVAPPDPYKLDKSRDGENSEVRLLDRSDPSKRTSLQSENIPDPMDAEQTWPTEDEIAASQAETKKMKLVKRVPKGYSEYQAAWIPDVEEVEDPDGKDDDDMSEDDDDDKEDDNEDFMSCDNKSFEDEYEKRDSDTEEFQDTVSVASEAAINDEKYDQQMDFQEERETLKKLQQARTDQLWPDEIDTPLDVPARERFQKYRGLESFRTSPWDAKENLPADYARIYQFQNFDRTKRRILNEAKEFEGVLPGLYVTLYVINVPESRWNAFKSAQLMDNIIVYGMLPHEHQMCVMNVVLQRMPDSEVPLKSKEQLIIQCGYRRFVVNPIYSQHTNGDKHKFERYFRPYETVCATFYAPIQFPPAPVLAFKVNPDSTLALVARGRLLSCNPDRIVLKRVVLSGHPMRINRKSASIRYMFFYKEDVEYFKPVKLRTKCGRLGHIKESLGTHGHMKCYFDGQLRSYDTAFMYLYKRVFPKWTYEECLVRTAEHERQHASANRRSSQQVAMEE

Sequence caution

The sequence AAL13820.1 differs from that shown. Reason: Erroneous initiation

Features

Showing features for compositional bias, sequence conflict.

Type
IDPosition(s)Description
Compositional bias317-341Basic and acidic residues
Compositional bias394-423Acidic residues
Compositional bias424-447Basic and acidic residues
Sequence conflict570in Ref. 3; AAO24947

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AE014296
EMBL· GenBank· DDBJ
AAF51709.1
EMBL· GenBank· DDBJ
Genomic DNA
BT003192
EMBL· GenBank· DDBJ
AAO24947.1
EMBL· GenBank· DDBJ
mRNA
BT044092
EMBL· GenBank· DDBJ
ACH92157.1
EMBL· GenBank· DDBJ
mRNA
AY058591
EMBL· GenBank· DDBJ
AAL13820.1
EMBL· GenBank· DDBJ
mRNA Different initiation

Genome annotation databases

Similar Proteins

Disclaimer

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