The genome sequence of Drosophila melanogaster.Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A.[...], Venter J.C.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCScience 287:2185-2195 (2000)Cited in99+99+Mapped to9
Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A., Patel S., Adams M., Champe M., Dugan S.P.[...], Rubin G.M.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Biol. 3:RESEARCH0079-RESEARCH0079 (2002)Cited in299+Mapped to12
Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H.[...], Lewis S.E.View abstractCited forGENOME REANNOTATIONStrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Biol. 3:RESEARCH0083.1-RESEARCH0083.22 (2002)Cited in99+99+Mapped to25
The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J.W., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E.[...], Celniker S.E.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Biol. 3:RESEARCH0084.1-RESEARCH0084.20 (2002)Cited in399+
Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A.[...], Karpen G.H.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Biol 3:RESEARCH0085-RESEARCH0085 (2002)Cited in99+Mapped to8
Combined evidence annotation of transposable elements in genome sequences.Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCPLoS Comput Biol 1:166-175 (2005)Cited in99+
No title available.Stapleton M., Carlson J., Chavez C., Frise E., George R., Pacleb J., Park S., Wan K., Yu C., Celniker S.Cited forNUCLEOTIDE SEQUENCEStrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)Submission Submitted to EMBL/GenBank/DDBJ databases (AUG-2005)Cited in399+
No title available.Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S., Svirskas R., Rubin G.Cited forNUCLEOTIDE SEQUENCECategorySequencesSourceUniProtKB unreviewed (TrEMBL)Submission Submitted to EMBL/GenBank/DDBJ databases (AUG-2006)Cited in399+
The Release 5.1 annotation of Drosophila melanogaster heterochromatin.Smith C.D., Shu S., Mungall C.J., Karpen G.H.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCScience 316:1586-1591 (2007)Cited in99+Mapped to2
Sequence finishing and mapping of Drosophila melanogaster heterochromatin.Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M., Frise E., Wan K.H., Park S., Mendez-Lago M.[...], Celniker S.E.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCScience 316:1625-1628 (2007)Cited in199+
Gene Model Annotations for Drosophila melanogaster: Impact of High- Throughput Data.FlyBase ConsortiumMatthews B.B., Dos Santos G., Crosby M.A., Emmert D.B., St Pierre S.E., Gramates L.S., Zhou P., Schroeder A.J., Falls K.[...], Gelbart W.M.View abstractCited forNUCLEOTIDE SEQUENCECategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCG3 (Bethesda) 5:1721-1736 (2015)Cited in99+Mapped to99+
Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.FlyBase ConsortiumCrosby M.A., Gramates L.S., Dos Santos G., Matthews B.B., St Pierre S.E., Zhou P., Schroeder A.J., Falls K., Emmert D.B.[...], Gelbart W.M.View abstractCited forNUCLEOTIDE SEQUENCECategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCG3 (Bethesda) 5:1737-1749 (2015)Cited in99+Mapped to99+
The Release 6 reference sequence of the Drosophila melanogaster genome.Hoskins R.A., Carlson J.W., Wan K.H., Park S., Mendez I., Galle S.E., Booth B.W., Pfeiffer B.D., George R.A.[...], Celniker S.E.View abstractCited forNUCLEOTIDE SEQUENCECategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Res 25:445-458 (2015)Cited in99+Mapped to24
No title available.FlyBaseCited forNUCLEOTIDE SEQUENCECategorySequencesSourceUniProtKB unreviewed (TrEMBL)Submission Submitted to EMBL/GenBank/DDBJ databases (DEC-2023)Cited in99+
Drosophila melanogaster release 4 sequence.Berkeley Drosophila Genome ProjectCelniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R., Hoskins R., Stapleton M., Pacleb J.[...], Rubin G.Cited forNUCLEOTIDE SEQUENCECategorySequencesSourceUniProtKB unreviewed (TrEMBL)Submission Submitted to EMBL/GenBank/DDBJ databases (JUN-2024)Cited in99+
Next-generation large-scale binary protein interaction network for Drosophila melanogaster.Tang H.W., Spirohn K., Hu Y., Hao T., Kovacs I.A., Gao Y., Binari R., Yang-Zhou D., Wan K.H.[...], Mohr S.E.View abstractCategoryFunctionSourceFlyBase: FBgn0051441PubMedEurope PMCNat Commun 14:2162-2162 (2023)Mapped to99+
Twenty-seven ZAD-ZNF genes of Drosophila melanogaster are orthologous to the embryo polarity determining mosquito gene cucoid.Li M., Kasan K., Saha Z., Yoon Y., Schmidt-Ott U.View abstractCategorySequencesSourceFlyBase: FBgn0051441PubMedEurope PMCPLoS One 18:e0274716-e0274716 (2023)Mapped to40
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes.Lopez-Varea A., Vega-Cuesta P., Ruiz-Gomez A., Ostale C.M., Molnar C., Hevia C.F., Martin M., Organista M.F., de Celis J.[...], de Celis J.F.View abstractCategoryFunctionSourceFlyBase: FBgn0051441PubMedEurope PMCG3 (Bethesda) 11:jkab349-jkab349 (2021)Mapped to99+
An RNA-interference screen in Drosophila to identify ZAD-containing C2H2 zinc finger genes that function in female germ cells.Shapiro-Kulnane L., Bautista O., Salz H.K.View abstractCategoryFunctionSourceFlyBase: FBgn0051441PubMedEurope PMCG3 (Bethesda) 11:jkaa016-jkaa016 (2021)Mapped to99+
Innovation of heterochromatin functions drives rapid evolution of essential ZAD-ZNF genes in <i>Drosophila</i>.Kasinathan B., Colmenares S.U., McConnell H., Young J.M., Karpen G.H., Malik H.S.View abstractCategoryFunctionSourceFlyBase: FBgn0051441PubMedEurope PMCElife 9:e63368-e63368 (2020)Mapped to99+
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 <i>Drosophila</i> genes conserved in humans.Wei P., Xue W., Zhao Y., Ning G., Wang J.View abstractCategoryFunctionSourceFlyBase: FBgn0051441PubMedEurope PMCGenome Res 30:95-106 (2020)Mapped to99+
A Comprehensive Drosophila melanogaster Transcription Factor Interactome.Shokri L., Inukai S., Hafner A., Weinand K., Hens K., Vedenko A., Gisselbrecht S.S., Dainese R., Bischof J.[...], Bulyk M.L.View abstractCategoriesFunction, InteractionSourceFlyBase: FBgn0051441PubMedEurope PMCCell Rep 27:955-970.e7 (2019)Mapped to99+
Sensory neuron lineage mapping and manipulation in the Drosophila olfactory system.Chai P.C., Cruchet S., Wigger L., Benton R.View abstractCategoriesFunction, ExpressionSourceFlyBase: FBgn0051441PubMedEurope PMCNat Commun 10:643-643 (2019)Mapped to99+
ZAD-Domain Is Essential for Nuclear Localization of Insulator Proteins in Drosophila melanogaster.Zolotarev N.A., Maksimenko O.G., Georgiev P.G., Bonchuk A.N.View abstractCategoriesFunction, Interaction, Subcellular LocationSourceFlyBase: FBgn0051441PubMedEurope PMCActa Naturae 8:97-102 (2016)Mapped to99+
Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs.Li H., Hu C., Bai L., Li H., Li M., Zhao X., Czajkowsky D.M., Shao Z.View abstractCategoriesFunction, SequencesSourceFlyBase: FBgn0051441PubMedEurope PMCDNA Res 23:571-580 (2016)Mapped to99+