Q9SUE0 · YMG12_ARATH
- ProteinYlmG homolog protein 1-2, chloroplastic
- GeneYLMG1-2
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids218 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score3/5
Function
function
Not required for the biogenesis and accumulation of native cytochrome b6 in the thylakoid membrane. Not functionally involved in the pathway for covalent binding of the c-type heme to cytochrome b6.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | chloroplast | |
Cellular Component | chloroplast envelope | |
Cellular Component | chloroplast thylakoid membrane | |
Cellular Component | plasma membrane |
Names & Taxonomy
Protein names
- Recommended nameYlmG homolog protein 1-2, chloroplastic
- Short namesAtYLMG1-2
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9SUE0
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Plastid, chloroplast thylakoid membrane ; Multi-pass membrane protein
Features
Showing features for transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Transmembrane | 133-153 | Helical | ||||
Sequence: LTVVAAGLSKWLDIYSGVLMV | ||||||
Transmembrane | 187-207 | Helical | ||||
Sequence: IIPPVFDTLDVSPLLAFAVLG |
Keywords
- Cellular component
Phenotypes & Variants
Disruption phenotype
No visible phenotype under normal growth conditions.
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 19 variants from UniProt as well as other sources including ClinVar and dbSNP.
PTM/Processing
Features
Showing features for transit peptide, chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Transit peptide | 1-83 | Chloroplast | ||||
Sequence: MASFTTNSLALRASILANPRLPPPIIRPRLSLPRKLSFNLSLHNARTIVSSAVTSSSPVLSSKPPSQFPFSDSTRSITTLVLL | ||||||
Chain | PRO_0000433267 | 84-218 | YlmG homolog protein 1-2, chloroplastic | |||
Sequence: AGVVIKSLIQKLSVAIVNLSPQIQASFRTASPLFFASLRDRPAGYLNTPLTVVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILNNSRG |
Proteomic databases
Expression
Gene expression databases
Interaction
Protein-protein interaction databases
Structure
Sequence
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
- Length218
- Mass (Da)23,705
- Last updated2000-05-01 v1
- Checksum8F54991DDA2FFB49
Features
Showing features for sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Sequence conflict | 79 | in Ref. 4; AAM64721 | ||||
Sequence: T → N | ||||||
Sequence conflict | 167 | in Ref. 4; AAM64721 | ||||
Sequence: R → G |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AL035524 EMBL· GenBank· DDBJ | CAB36768.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AL161572 EMBL· GenBank· DDBJ | CAB79601.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002687 EMBL· GenBank· DDBJ | AEE85417.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AK226522 EMBL· GenBank· DDBJ | BAE98662.1 EMBL· GenBank· DDBJ | mRNA | ||
AY087165 EMBL· GenBank· DDBJ | AAM64721.1 EMBL· GenBank· DDBJ | mRNA |