Q9SU64 · CNG16_ARATH

Function

function

Putative cyclic nucleotide-gated ion channel.

Features

Showing features for binding site.

170550100150200250300350400450500550600650700
TypeIDPosition(s)Description
Binding site457-580a nucleoside 3',5'-cyclic phosphate (UniProtKB | ChEBI)
Binding site528a nucleoside 3',5'-cyclic phosphate (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentplasma membrane
Molecular Functioncalmodulin binding
Molecular FunctioncAMP binding
Molecular FunctioncGMP binding
Molecular Functionmonoatomic ion channel activity

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Probable cyclic nucleotide-gated ion channel 16
  • Alternative names
    • Cyclic nucleotide- and calmodulin-regulated ion channel 16

Gene names

    • Name
      CNGC16
    • ORF names
      T17F15.120
    • Ordered locus names
      At3g48010

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q9SU64
  • Secondary accessions
    • Q1PEH4

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Cell membrane
; Multi-pass membrane protein

Features

Showing features for topological domain, transmembrane.

Type
IDPosition(s)Description
Topological domain1-57Cytoplasmic
Transmembrane58-78Helical; Name=H1
Topological domain79-91Extracellular
Transmembrane92-112Helical; Name=H2
Topological domain113-147Cytoplasmic
Transmembrane148-168Helical; Name=H3
Topological domain169-180Extracellular
Transmembrane181-201Helical; Name=H4
Topological domain202-222Cytoplasmic
Transmembrane223-243Helical; Name=H5
Topological domain244-353Extracellular
Transmembrane354-374Helical; Name=H6
Topological domain375-705Cytoplasmic

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00002193441-705Probable cyclic nucleotide-gated ion channel 16

Proteomic databases

Expression

Gene expression databases

Interaction

Subunit

Homotetramer or heterotetramer.

Protein-protein interaction databases

Family & Domains

Features

Showing features for region, domain, compositional bias.

Type
IDPosition(s)Description
Region573-588Calmodulin-binding
Domain593-622IQ
Region636-655Disordered
Compositional bias638-655Polar residues
Region672-705Disordered

Domain

The binding of calmodulin to the C-terminus might interfere with cyclic nucleotide binding and thus channel activation.

Sequence similarities

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    705
  • Mass (Da)
    81,955
  • Last updated
    2000-05-01 v1
  • MD5 Checksum
    CF86339C8674CA94D5804721664A2071
MSNLHLYTSARFRNFPTTFSLRHHHNDPNNQRRRSIFSKLRDKTLDPGGDLITRWNHIFLITCLLALFLDPLYFYLPIVQAGTACMSIDVRFGIFVTCFRNLADLSFLIHILLKFKTAFVSKSSRVFGRGELVMDRREIAIRYLKSEFVIDLAATLPLPQIMIWFVIPNAGEFRYAAHQNHTLSLIVLIQYVPRFLVMLPLNRRIIKATGVAAKTAWSGAAYNLILYLLVSHVLGSVWYVLSIQRQHECWRRECIKEMNATHSPSCSLLFLDCGSLHDPGRQAWMRITRVLSNCDARNDDDQHFQFGMFGDAFTNDVTSSPFFDKYFYCLWWGLRNLSSYGQSLAASTLSSETIFSCFICVAGLVFFSHLIGNVQNYLQSTTARLDEWRVRRRDTEEWMRHRQLPDELQERVRRFVQYKWLTTRGVDEEAILRALPLDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVPSLNTKDTYVIREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPNINHNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFRRLHSKKLQHAFRYYSHQWRAWGTCFIQAAWRRYMKRKLAMELARQEEEDDYFYDDDGDYQFEEDMPESNNNNGDENSSNNQNLSATILASKFAANTKRGVLGNQRGSTRIDPDHPTLKMPKMFKPEDPGFF

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias638-655Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AL049658
EMBL· GenBank· DDBJ
CAB41138.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002686
EMBL· GenBank· DDBJ
AEE78356.1
EMBL· GenBank· DDBJ
Genomic DNA
DQ446744
EMBL· GenBank· DDBJ
ABE65999.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

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