Q9SSB7 · DGR1_ARATH
- ProteinProtein DUF642 L-GALACTONO-1,4-LACTONE-RESPONSIVE GENE 1
- GeneDGR1
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids370 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score3/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | extracellular region | |
Cellular Component | plant-type cell wall |
Names & Taxonomy
Protein names
- Recommended nameProtein DUF642 L-GALACTONO-1,4-LACTONE-RESPONSIVE GENE 1
- Short namesDUF642 L-GalL-RESPONSIVE GENE 1
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9SSB7
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
Phenotypes & Variants
Disruption phenotype
No obvious phenotype.
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 26 variants from UniProt as well as other sources including ClinVar and dbSNP.
PTM/Processing
Features
Showing features for signal, chain, glycosylation.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Signal | 1-22 | ||||
Chain | PRO_5014313264 | 23-370 | Protein DUF642 L-GALACTONO-1,4-LACTONE-RESPONSIVE GENE 1 | ||
Glycosylation | 124 | N-linked (GlcNAc...) asparagine | |||
Keywords
- PTM
Proteomic databases
Expression
Tissue specificity
Expressed at low levels in roots, seedlings and leaves.
Induction
Induced by L-galactono-1,4-lactone (L-GalL), the terminal precursor for ascorbic acid (AsA) biosynthesis in the Smirnoff-Wheeler pathway.
Developmental stage
Expressed at the root apex and at leaf primordia (PubMed:22323769).
Accumulates specifically in hypocotyls in shade conditions (PubMed:27401556).
Accumulates specifically in hypocotyls in shade conditions (PubMed:27401556).
Gene expression databases
Structure
Sequence
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
- Length370
- Mass (Da)40,226
- Last updated2000-05-01 v1
- ChecksumCAC2FDDBFA67BA5D
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AC009322 EMBL· GenBank· DDBJ | AAD55477.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002684 EMBL· GenBank· DDBJ | AEE36374.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
BT032869 EMBL· GenBank· DDBJ | ACD85595.1 EMBL· GenBank· DDBJ | mRNA |