Q9SIU8 · P2C20_ARATH
- ProteinProbable protein phosphatase 2C 20
- GenePPC3-1.2
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids290 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score3/5
Variants
Variant ID(s) | Position(s) | Change | Description | Clinical significance | Provenance | ||
---|---|---|---|---|---|---|---|
ENSVATH14525606 | 14 | L>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.5) Somatic: No Accession: 2:g.8898893A>T Codon: TTA/ATA Consequence type: missense Cytogenetic band: Genomic location: 2:g.8898893A>T Locations: - p.Leu14Ile (EnsemblPlants:AT2G20630.2) - c.40T>A (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH14525605 | 87 | I>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.03) Somatic: No Accession: 2:g.8898673A>G Codon: ATA/ACA Consequence type: missense Cytogenetic band: Genomic location: 2:g.8898673A>G Locations: - p.Ile87Thr (EnsemblPlants:AT2G20630.2) - c.260T>C (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH01853791 | 98 | K>E | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.54) Somatic: No Accession: 2:g.8898544T>C Codon: AAA/GAA Consequence type: missense Cytogenetic band: Genomic location: 2:g.8898544T>C Locations: - p.Lys98Glu (EnsemblPlants:AT2G20630.2) - c.292A>G (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH05543126 | 183 | G>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.02) Somatic: No Accession: 2:g.8898289C>G Codon: GGG/CGG Consequence type: missense Cytogenetic band: Genomic location: 2:g.8898289C>G Locations: - p.Gly183Arg (EnsemblPlants:AT2G20630.2) - c.547G>C (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH05543122 | 215 | D>E | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.85) Somatic: No Accession: 2:g.8898103G>C Codon: GAC/GAG Consequence type: missense Cytogenetic band: Genomic location: 2:g.8898103G>C Locations: - p.Asp215Glu (EnsemblPlants:AT2G20630.2) - c.645C>G (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH05543123 | 215 | D>N | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.37) Somatic: No Accession: 2:g.8898105C>T Codon: GAC/AAC Consequence type: missense Cytogenetic band: Genomic location: 2:g.8898105C>T Locations: - p.Asp215Asn (EnsemblPlants:AT2G20630.2) - c.643G>A (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH05543121 | 217 | N>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.56) Somatic: No Accession: 2:g.8898098T>G Codon: AAT/ACT Consequence type: missense Cytogenetic band: Genomic location: 2:g.8898098T>G Locations: - p.Asn217Thr (EnsemblPlants:AT2G20630.2) - c.650A>C (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH13303280 | 219 | D>N | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.1) Somatic: No Accession: 2:g.8898093C>T Codon: GAT/AAT Consequence type: missense Cytogenetic band: Genomic location: 2:g.8898093C>T Locations: - p.Asp219Asn (EnsemblPlants:AT2G20630.2) - c.655G>A (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH01853769 | 220 | H>D | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (1) Somatic: No Accession: 2:g.8898090G>C Codon: CAT/GAT Consequence type: missense Cytogenetic band: Genomic location: 2:g.8898090G>C Locations: - p.His220Asp (EnsemblPlants:AT2G20630.2) - c.658C>G (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH01853769 | 220 | H>N | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.27) Somatic: No Accession: 2:g.8898090G>T Codon: CAT/AAT Consequence type: missense Cytogenetic band: Genomic location: 2:g.8898090G>T Locations: - p.His220Asn (EnsemblPlants:AT2G20630.2) - c.658C>A (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH00240451 | 222 | T>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.14) Somatic: No Accession: 2:g.8898084T>A Codon: ACT/TCT Consequence type: missense Cytogenetic band: Genomic location: 2:g.8898084T>A Locations: - p.Thr222Ser (EnsemblPlants:AT2G20630.2) - c.664A>T (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
tmp_2_8898075_T_G | 225 | I>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (1) Somatic: No Accession: 2:g.8898075T>G Codon: ATC/CTC Consequence type: missense Cytogenetic band: Genomic location: 2:g.8898075T>G Locations: - p.Ile225Leu (EnsemblPlants:AT2G20630.2) - c.673A>C (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH01853760 | 266 | Q>E | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.25) Somatic: No Accession: 2:g.8897870G>C Codon: CAA/GAA Consequence type: missense Cytogenetic band: Genomic location: 2:g.8897870G>C Locations: - p.Gln266Glu (EnsemblPlants:AT2G20630.2) - c.796C>G (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH05543113 | 284 | L>H | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.61) Somatic: No Accession: 2:g.8897357A>T Codon: CTC/CAC Consequence type: missense Cytogenetic band: Genomic location: 2:g.8897357A>T Locations: - p.Leu284His (EnsemblPlants:AT2G20630.2) - c.851T>A (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
tmp_2_8897340_T_A | 290 | R>* | 1000Genomes | ||||
Consequence: stop gained Somatic: No Accession: 2:g.8897340T>A Codon: AGA/TGA Consequence type: stop gained Cytogenetic band: Genomic location: 2:g.8897340T>A Locations: - p.Arg290Ter (EnsemblPlants:AT2G20630.2) - c.868A>T (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: | |||||||
ENSVATH05543112 | 291 | *>L | 1000Genomes | ||||
Consequence: stop lost Somatic: No Accession: 2:g.8897336C>A Codon: TGA/TTA Consequence type: stop lost Cytogenetic band: Genomic location: 2:g.8897336C>A Locations: - p.Ter291LeuextTer3 (EnsemblPlants:AT2G20630.2) - c.872G>T (EnsemblPlants:AT2G20630.2) Source type: large scale study Cross-references: |