Q9S7L8 · CDA5_ARATH

Function

function

This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.

Catalytic activity

Cofactor

Zn2+ (UniProtKB | Rhea| CHEBI:29105 )

Note: Binds 1 zinc ion per subunit.

Features

Showing features for binding site, active site.

Type
IDPosition(s)Description
Binding site58-60substrate
Binding site71Zn2+ (UniProtKB | ChEBI); catalytic
Active site73Proton donor
Binding site104Zn2+ (UniProtKB | ChEBI); catalytic
Binding site107Zn2+ (UniProtKB | ChEBI); catalytic

GO annotations

AspectTerm
Cellular Componentcytoplasm
Molecular Functioncytidine deaminase activity
Molecular Functionidentical protein binding
Molecular Functionzinc ion binding
Biological Processcytidine deamination

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

Gene names

    • Name
      CDA5
    • Synonyms
      DESG
    • ORF names
      T16L4.150
    • Ordered locus names
      At4g29640

Organism names

  • Taxonomic identifier
  • Strains
    • cv. Columbia
    • cv. Landsberg erecta
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q9S7L8
  • Secondary accessions
    • Q9ZT32

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00004291471-346Cytidine deaminase 5

Proteomic databases

Expression

Gene expression databases

Interaction

Subunit

Homodimer.

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain20-148CMP/dCMP-type deaminase 1
Domain183-304CMP/dCMP-type deaminase 2

Sequence similarities

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    346
  • Mass (Da)
    38,081
  • Last updated
    2000-05-01 v1
  • Checksum
    76417250E0AAD197
MAQQYKFVFTAEQAASEGVTDHKKLPKLIRKARNLVKAPSKVGAVGRASSGRFYLGVNVEFKGLLPHFSIHAEQFLIANLALNSEPKLTHLAVSDNGTVFQDPCYDCTRFLKEINNAHQIEILIKNAHGRDGSFKSLESHMPDEFGSESILSAEPSLLLMERDNCLALIDEDSAAGGISSNADLCSFLKLEALKAANKSYAPYRKCPSGVALFCEGEVYAGWYIETVDRTISLGPVQAALVDFIARGEGKGFDKITGAVLVEKKDAKVGQEDTARKLLEKIAAPNCDFKVFHCQEERKDWITGAVLVEKKDAKEGQEGKLLEKIAAPNCDFKVSHCDEELKDWIKL

Sequence caution

The sequence AAC69569.1 differs from that shown. Reason: Erroneous gene model prediction

Features

Showing features for sequence conflict.

TypeIDPosition(s)Description
Sequence conflict95in Ref. 2; AAC69569
Sequence conflict109in Ref. 2; AAC69569
Sequence conflict345in Ref. 2; AAC69569

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AF121877
EMBL· GenBank· DDBJ
AAD30447.1
EMBL· GenBank· DDBJ
Genomic DNA
AF080676
EMBL· GenBank· DDBJ
AAC69569.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
AL079344
EMBL· GenBank· DDBJ
CAB45324.1
EMBL· GenBank· DDBJ
Genomic DNA
AL161575
EMBL· GenBank· DDBJ
CAB79722.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002687
EMBL· GenBank· DDBJ
AEE85654.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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