Q9M354 · AGD6_ARATH
- ProteinProbable ADP-ribosylation factor GTPase-activating protein AGD6
- GeneAGD6
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids459 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score3/5
Function
function
GTPase-activating protein (GAP) for ADP ribosylation factor (ARF).
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytosol | |
Molecular Function | GTPase activator activity | |
Molecular Function | metal ion binding | |
Biological Process | vesicle-mediated transport |
Keywords
- Molecular function
- Ligand
Names & Taxonomy
Protein names
- Recommended nameProbable ADP-ribosylation factor GTPase-activating protein AGD6
- Short namesARF GAP AGD6
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9M354
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
PTM/Processing
Features
Showing features for chain, modified residue.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000352498 | 1-459 | Probable ADP-ribosylation factor GTPase-activating protein AGD6 | |||
Sequence: MAATRQLRTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSAIQIKKMEAGGNERLNKFFAQYGIAKETDIISKYNSNAASVYRDRIQALAEGRPWNDPPVVKEANKKPPLAQGGYGNNNNNNNGGWDSWDNDDSYKSDMRRNQSANDFRASGNREGAHVKSKSSEDIYTRSQLEASAAGKESFFARRMAENESKPEGLPPSQGGKYVGFGSSSAPPPRNNQQDDVFSVVSQGFGRLSLVAASAAQSAASVVQTGTKEFTSKVKEGGYDHKVSETVNVVANKTTEIGHRTWGIMKGVMAMATQKVEEFTKEGSTSWNQQSENEGNGYYQNFGNGNKAANSSVGGGRPQSSSTSGHYNNSQNSNSWDSWGENENKKTEAVAPKGSSASNDDDGWTGWDDHDAKDDGFDGHYQSAGDKKSAGHNGKSDTAWTGGGFL | ||||||
Modified residue | 169 | Phosphoserine | ||||
Sequence: S | ||||||
Modified residue | 188 | Phosphoserine | ||||
Sequence: S |
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Gene expression databases
Interaction
Binary interactions
Type | Entry 1 | Entry 2 | Number of experiments | Intact | |
---|---|---|---|---|---|
BINARY | Q9M354 | PRA1F3 Q9LIC6 | 3 | EBI-21138098, EBI-2010961 |
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for domain, zinc finger, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 4-120 | Arf-GAP | ||||
Sequence: TRQLRTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSWSAIQIKKMEAGGNERLNKFFAQYGIAKETDIISKYNSNAASVYRDRIQALAEGRPW | ||||||
Zinc finger | 19-42 | C4-type | ||||
Sequence: CVDCAQKNPQWASVSYGIFMCLEC | ||||||
Region | 118-195 | Disordered | ||||
Sequence: RPWNDPPVVKEANKKPPLAQGGYGNNNNNNNGGWDSWDNDDSYKSDMRRNQSANDFRASGNREGAHVKSKSSEDIYTR | ||||||
Compositional bias | 137-155 | Polar residues | ||||
Sequence: QGGYGNNNNNNNGGWDSWD | ||||||
Compositional bias | 178-192 | Basic and acidic residues | ||||
Sequence: NREGAHVKSKSSEDI | ||||||
Region | 214-248 | Disordered | ||||
Sequence: AENESKPEGLPPSQGGKYVGFGSSSAPPPRNNQQD | ||||||
Compositional bias | 333-393 | Polar residues | ||||
Sequence: TKEGSTSWNQQSENEGNGYYQNFGNGNKAANSSVGGGRPQSSSTSGHYNNSQNSNSWDSWG | ||||||
Region | 333-459 | Disordered | ||||
Sequence: TKEGSTSWNQQSENEGNGYYQNFGNGNKAANSSVGGGRPQSSSTSGHYNNSQNSNSWDSWGENENKKTEAVAPKGSSASNDDDGWTGWDDHDAKDDGFDGHYQSAGDKKSAGHNGKSDTAWTGGGFL | ||||||
Compositional bias | 416-435 | Basic and acidic residues | ||||
Sequence: GWTGWDDHDAKDDGFDGHYQ |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length459
- Mass (Da)49,724
- Last updated2000-10-01 v1
- ChecksumA9C91A4AA56F3950
Sequence caution
Features
Showing features for compositional bias, sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 137-155 | Polar residues | ||||
Sequence: QGGYGNNNNNNNGGWDSWD | ||||||
Compositional bias | 178-192 | Basic and acidic residues | ||||
Sequence: NREGAHVKSKSSEDI | ||||||
Sequence conflict | 307 | in Ref. 1; AAG17006 | ||||
Sequence: T → I | ||||||
Compositional bias | 333-393 | Polar residues | ||||
Sequence: TKEGSTSWNQQSENEGNGYYQNFGNGNKAANSSVGGGRPQSSSTSGHYNNSQNSNSWDSWG | ||||||
Compositional bias | 416-435 | Basic and acidic residues | ||||
Sequence: GWTGWDDHDAKDDGFDGHYQ |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AF184146 EMBL· GenBank· DDBJ | AAG17006.1 EMBL· GenBank· DDBJ | mRNA | Frameshift | |
AL132960 EMBL· GenBank· DDBJ | CAB88333.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002686 EMBL· GenBank· DDBJ | AEE79130.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002686 EMBL· GenBank· DDBJ | AEE79131.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002686 EMBL· GenBank· DDBJ | ANM64695.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
BT030393 EMBL· GenBank· DDBJ | ABO45696.1 EMBL· GenBank· DDBJ | mRNA |