Q9M291 · SC24B_ARATH
- ProteinProtein transport protein SEC24 B
- GeneSEC24B
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids1096 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score4/5
Variants
Variant ID(s) | Position(s) | Change | Description | Clinical significance | Provenance | ||
---|---|---|---|---|---|---|---|
ENSVATH06205667 | 2 | A>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.06) Somatic: No Accession: 3:g.16019870C>T Codon: GCT/ACT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019870C>T Locations: - p.Ala2Thr (EnsemblPlants:AT3G44340.1) - c.4G>A (EnsemblPlants:AT3G44340.1) - p.Ala2Thr (EnsemblPlants:AT3G44340.4) - c.4G>A (EnsemblPlants:AT3G44340.4) - p.Ala2Thr (EnsemblPlants:AT3G44340.3) - c.4G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019861_C_T | 5 | V>M | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.06) Somatic: No Accession: 3:g.16019861C>T Codon: GTG/ATG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019861C>T Locations: - p.Val5Met (EnsemblPlants:AT3G44340.1) - c.13G>A (EnsemblPlants:AT3G44340.1) - p.Val5Met (EnsemblPlants:AT3G44340.4) - c.13G>A (EnsemblPlants:AT3G44340.4) - p.Val5Met (EnsemblPlants:AT3G44340.3) - c.13G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205665 | 11 | R>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.02) Somatic: No Accession: 3:g.16019842C>T Codon: AGA/AAA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019842C>T Locations: - p.Arg11Lys (EnsemblPlants:AT3G44340.1) - c.32G>A (EnsemblPlants:AT3G44340.1) - p.Arg11Lys (EnsemblPlants:AT3G44340.4) - c.32G>A (EnsemblPlants:AT3G44340.4) - p.Arg11Lys (EnsemblPlants:AT3G44340.3) - c.32G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205664 | 14 | N>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.28) Somatic: No Accession: 3:g.16019832G>T Codon: AAC/AAA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019832G>T Locations: - p.Asn14Lys (EnsemblPlants:AT3G44340.1) - c.42C>A (EnsemblPlants:AT3G44340.1) - p.Asn14Lys (EnsemblPlants:AT3G44340.4) - c.42C>A (EnsemblPlants:AT3G44340.4) - p.Asn14Lys (EnsemblPlants:AT3G44340.3) - c.42C>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205663 | 15 | N>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.43) Somatic: No Accession: 3:g.16019830T>G Codon: AAT/ACT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019830T>G Locations: - p.Asn15Thr (EnsemblPlants:AT3G44340.1) - c.44A>C (EnsemblPlants:AT3G44340.1) - p.Asn15Thr (EnsemblPlants:AT3G44340.4) - c.44A>C (EnsemblPlants:AT3G44340.4) - p.Asn15Thr (EnsemblPlants:AT3G44340.3) - c.44A>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019809_G_T | 22 | P>H | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.06) Somatic: No Accession: 3:g.16019809G>T Codon: CCT/CAT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019809G>T Locations: - p.Pro22His (EnsemblPlants:AT3G44340.1) - c.65C>A (EnsemblPlants:AT3G44340.1) - p.Pro22His (EnsemblPlants:AT3G44340.4) - c.65C>A (EnsemblPlants:AT3G44340.4) - p.Pro22His (EnsemblPlants:AT3G44340.3) - c.65C>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH14340641 | 24 | N>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.04) Somatic: No Accession: 3:g.16019802A>T Codon: AAT/AAA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019802A>T Locations: - p.Asn24Lys (EnsemblPlants:AT3G44340.1) - c.72T>A (EnsemblPlants:AT3G44340.1) - p.Asn24Lys (EnsemblPlants:AT3G44340.4) - c.72T>A (EnsemblPlants:AT3G44340.4) - p.Asn24Lys (EnsemblPlants:AT3G44340.3) - c.72T>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019795_G_T | 27 | P>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.02) Somatic: No Accession: 3:g.16019795G>T Codon: CCT/ACT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019795G>T Locations: - p.Pro27Thr (EnsemblPlants:AT3G44340.1) - c.79C>A (EnsemblPlants:AT3G44340.1) - p.Pro27Thr (EnsemblPlants:AT3G44340.4) - c.79C>A (EnsemblPlants:AT3G44340.4) - p.Pro27Thr (EnsemblPlants:AT3G44340.3) - c.79C>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205662 | 42 | N>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.05) Somatic: No Accession: 3:g.16019749T>C Codon: AAT/AGT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019749T>C Locations: - p.Asn42Ser (EnsemblPlants:AT3G44340.1) - c.125A>G (EnsemblPlants:AT3G44340.1) - p.Asn42Ser (EnsemblPlants:AT3G44340.4) - c.125A>G (EnsemblPlants:AT3G44340.4) - p.Asn42Ser (EnsemblPlants:AT3G44340.3) - c.125A>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019734_C_T | 47 | R>Q | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.13) Somatic: No Accession: 3:g.16019734C>T Codon: CGG/CAG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019734C>T Locations: - p.Arg47Gln (EnsemblPlants:AT3G44340.1) - c.140G>A (EnsemblPlants:AT3G44340.1) - p.Arg47Gln (EnsemblPlants:AT3G44340.4) - c.140G>A (EnsemblPlants:AT3G44340.4) - p.Arg47Gln (EnsemblPlants:AT3G44340.3) - c.140G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019716_G_T | 53 | P>H | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0) Somatic: No Accession: 3:g.16019716G>T Codon: CCT/CAT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019716G>T Locations: - p.Pro53His (EnsemblPlants:AT3G44340.1) - c.158C>A (EnsemblPlants:AT3G44340.1) - p.Pro53His (EnsemblPlants:AT3G44340.4) - c.158C>A (EnsemblPlants:AT3G44340.4) - p.Pro53His (EnsemblPlants:AT3G44340.3) - c.158C>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019704_G_C | 57 | P>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0) Somatic: No Accession: 3:g.16019704G>C Codon: CCT/CGT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019704G>C Locations: - p.Pro57Arg (EnsemblPlants:AT3G44340.1) - c.170C>G (EnsemblPlants:AT3G44340.1) - p.Pro57Arg (EnsemblPlants:AT3G44340.4) - c.170C>G (EnsemblPlants:AT3G44340.4) - p.Pro57Arg (EnsemblPlants:AT3G44340.3) - c.170C>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396796 | 64 | G>C | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.04) Somatic: No Accession: 3:g.16019684C>A Codon: GGT/TGT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019684C>A Locations: - p.Gly64Cys (EnsemblPlants:AT3G44340.1) - c.190G>T (EnsemblPlants:AT3G44340.1) - p.Gly64Cys (EnsemblPlants:AT3G44340.4) - c.190G>T (EnsemblPlants:AT3G44340.4) - p.Gly64Cys (EnsemblPlants:AT3G44340.3) - c.190G>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407371 | 71 | P>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.01) Somatic: No Accession: 3:g.16019662G>A Codon: CCT/CTT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019662G>A Locations: - p.Pro71Leu (EnsemblPlants:AT3G44340.1) - c.212C>T (EnsemblPlants:AT3G44340.1) - p.Pro71Leu (EnsemblPlants:AT3G44340.4) - c.212C>T (EnsemblPlants:AT3G44340.4) - p.Pro71Leu (EnsemblPlants:AT3G44340.3) - c.212C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH14340640 | 71 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.43) Somatic: No Accession: 3:g.16019663G>A Codon: CCT/TCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019663G>A Locations: - p.Pro71Ser (EnsemblPlants:AT3G44340.1) - c.211C>T (EnsemblPlants:AT3G44340.1) - p.Pro71Ser (EnsemblPlants:AT3G44340.4) - c.211C>T (EnsemblPlants:AT3G44340.4) - p.Pro71Ser (EnsemblPlants:AT3G44340.3) - c.211C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396795 | 76 | Q>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.48) Somatic: No Accession: 3:g.16019647T>C Codon: CAA/CGA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019647T>C Locations: - p.Gln76Arg (EnsemblPlants:AT3G44340.1) - c.227A>G (EnsemblPlants:AT3G44340.1) - p.Gln76Arg (EnsemblPlants:AT3G44340.4) - c.227A>G (EnsemblPlants:AT3G44340.4) - p.Gln76Arg (EnsemblPlants:AT3G44340.3) - c.227A>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407366 | 78 | P>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.64) Somatic: No Accession: 3:g.16019641G>A Codon: CCA/CTA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019641G>A Locations: - p.Pro78Leu (EnsemblPlants:AT3G44340.1) - c.233C>T (EnsemblPlants:AT3G44340.1) - p.Pro78Leu (EnsemblPlants:AT3G44340.4) - c.233C>T (EnsemblPlants:AT3G44340.4) - p.Pro78Leu (EnsemblPlants:AT3G44340.3) - c.233C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019629_G_T | 82 | P>Q | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.09) Somatic: No Accession: 3:g.16019629G>T Codon: CCA/CAA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019629G>T Locations: - p.Pro82Gln (EnsemblPlants:AT3G44340.1) - c.245C>A (EnsemblPlants:AT3G44340.1) - p.Pro82Gln (EnsemblPlants:AT3G44340.4) - c.245C>A (EnsemblPlants:AT3G44340.4) - p.Pro82Gln (EnsemblPlants:AT3G44340.3) - c.245C>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH14340639 | 84 | A>P | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.37) Somatic: No Accession: 3:g.16019624C>G Codon: GCT/CCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019624C>G Locations: - p.Ala84Pro (EnsemblPlants:AT3G44340.1) - c.250G>C (EnsemblPlants:AT3G44340.1) - p.Ala84Pro (EnsemblPlants:AT3G44340.4) - c.250G>C (EnsemblPlants:AT3G44340.4) - p.Ala84Pro (EnsemblPlants:AT3G44340.3) - c.250G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH14340639 | 84 | A>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.61) Somatic: No Accession: 3:g.16019624C>T Codon: GCT/ACT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019624C>T Locations: - p.Ala84Thr (EnsemblPlants:AT3G44340.1) - c.250G>A (EnsemblPlants:AT3G44340.1) - p.Ala84Thr (EnsemblPlants:AT3G44340.4) - c.250G>A (EnsemblPlants:AT3G44340.4) - p.Ala84Thr (EnsemblPlants:AT3G44340.3) - c.250G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407364 | 85 | R>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.2) Somatic: No Accession: 3:g.16019620C>G Codon: AGA/ACA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019620C>G Locations: - p.Arg85Thr (EnsemblPlants:AT3G44340.1) - c.254G>C (EnsemblPlants:AT3G44340.1) - p.Arg85Thr (EnsemblPlants:AT3G44340.4) - c.254G>C (EnsemblPlants:AT3G44340.4) - p.Arg85Thr (EnsemblPlants:AT3G44340.3) - c.254G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396792 | 89 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.11) Somatic: No Accession: 3:g.16019609G>A Codon: CCT/TCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019609G>A Locations: - p.Pro89Ser (EnsemblPlants:AT3G44340.1) - c.265C>T (EnsemblPlants:AT3G44340.1) - p.Pro89Ser (EnsemblPlants:AT3G44340.4) - c.265C>T (EnsemblPlants:AT3G44340.4) - p.Pro89Ser (EnsemblPlants:AT3G44340.3) - c.265C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396791 | 91 | P>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.31) Somatic: No Accession: 3:g.16019603G>C Codon: CCT/GCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019603G>C Locations: - p.Pro91Ala (EnsemblPlants:AT3G44340.1) - c.271C>G (EnsemblPlants:AT3G44340.1) - p.Pro91Ala (EnsemblPlants:AT3G44340.4) - c.271C>G (EnsemblPlants:AT3G44340.4) - p.Pro91Ala (EnsemblPlants:AT3G44340.3) - c.271C>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019600_CAGG_GAGG,C | 92 | A>P | 1000Genomes | ||||
Consequence: missense Somatic: No Accession: 3:g.16019600delCinsG Codon: CCTGCT/CCTCCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019600delCinsG Locations: - p.Ala92Pro (EnsemblPlants:AT3G44340.1) - c.274delGinsC (EnsemblPlants:AT3G44340.1) - p.Ala92Pro (EnsemblPlants:AT3G44340.4) - c.274delGinsC (EnsemblPlants:AT3G44340.4) - p.Ala92Pro (EnsemblPlants:AT3G44340.3) - c.274delGinsC (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407363 | 102 | Q>H | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.31) Somatic: No Accession: 3:g.16019568C>A Codon: CAG/CAT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019568C>A Locations: - p.Gln102His (EnsemblPlants:AT3G44340.1) - c.306G>T (EnsemblPlants:AT3G44340.1) - p.Gln102His (EnsemblPlants:AT3G44340.4) - c.306G>T (EnsemblPlants:AT3G44340.4) - p.Gln102His (EnsemblPlants:AT3G44340.3) - c.306G>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019566_A_G | 103 | V>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.9) Somatic: No Accession: 3:g.16019566A>G Codon: GTA/GCA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019566A>G Locations: - p.Val103Ala (EnsemblPlants:AT3G44340.1) - c.308T>C (EnsemblPlants:AT3G44340.1) - p.Val103Ala (EnsemblPlants:AT3G44340.4) - c.308T>C (EnsemblPlants:AT3G44340.4) - p.Val103Ala (EnsemblPlants:AT3G44340.3) - c.308T>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407362 | 103 | V>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.54) Somatic: No Accession: 3:g.16019567C>A Codon: GTA/TTA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019567C>A Locations: - p.Val103Leu (EnsemblPlants:AT3G44340.1) - c.307G>T (EnsemblPlants:AT3G44340.1) - p.Val103Leu (EnsemblPlants:AT3G44340.4) - c.307G>T (EnsemblPlants:AT3G44340.4) - p.Val103Leu (EnsemblPlants:AT3G44340.3) - c.307G>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019563_G_A | 104 | S>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.17) Somatic: No Accession: 3:g.16019563G>A Codon: TCG/TTG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019563G>A Locations: - p.Ser104Leu (EnsemblPlants:AT3G44340.1) - c.311C>T (EnsemblPlants:AT3G44340.1) - p.Ser104Leu (EnsemblPlants:AT3G44340.4) - c.311C>T (EnsemblPlants:AT3G44340.4) - p.Ser104Leu (EnsemblPlants:AT3G44340.3) - c.311C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205659 | 106 | P>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.04) Somatic: No Accession: 3:g.16019557G>A Codon: CCT/CTT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019557G>A Locations: - p.Pro106Leu (EnsemblPlants:AT3G44340.1) - c.317C>T (EnsemblPlants:AT3G44340.1) - p.Pro106Leu (EnsemblPlants:AT3G44340.4) - c.317C>T (EnsemblPlants:AT3G44340.4) - p.Pro106Leu (EnsemblPlants:AT3G44340.3) - c.317C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019554_C_A | 107 | G>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.26) Somatic: No Accession: 3:g.16019554C>A Codon: GGT/GTT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019554C>A Locations: - p.Gly107Val (EnsemblPlants:AT3G44340.1) - c.320G>T (EnsemblPlants:AT3G44340.1) - p.Gly107Val (EnsemblPlants:AT3G44340.4) - c.320G>T (EnsemblPlants:AT3G44340.4) - p.Gly107Val (EnsemblPlants:AT3G44340.3) - c.320G>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407360 | 108 | G>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.62) Somatic: No Accession: 3:g.16019552C>T Codon: GGT/AGT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019552C>T Locations: - p.Gly108Ser (EnsemblPlants:AT3G44340.1) - c.322G>A (EnsemblPlants:AT3G44340.1) - p.Gly108Ser (EnsemblPlants:AT3G44340.4) - c.322G>A (EnsemblPlants:AT3G44340.4) - p.Gly108Ser (EnsemblPlants:AT3G44340.3) - c.322G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205658 | 109 | F>Y | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (1) Somatic: No Accession: 3:g.16019548A>T Codon: TTT/TAT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019548A>T Locations: - p.Phe109Tyr (EnsemblPlants:AT3G44340.1) - c.326T>A (EnsemblPlants:AT3G44340.1) - p.Phe109Tyr (EnsemblPlants:AT3G44340.4) - c.326T>A (EnsemblPlants:AT3G44340.4) - p.Phe109Tyr (EnsemblPlants:AT3G44340.3) - c.326T>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019545_G_A | 110 | P>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.06) Somatic: No Accession: 3:g.16019545G>A Codon: CCG/CTG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019545G>A Locations: - p.Pro110Leu (EnsemblPlants:AT3G44340.1) - c.329C>T (EnsemblPlants:AT3G44340.1) - p.Pro110Leu (EnsemblPlants:AT3G44340.4) - c.329C>T (EnsemblPlants:AT3G44340.4) - p.Pro110Leu (EnsemblPlants:AT3G44340.3) - c.329C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH00396614 | 112 | V>G | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.36) Somatic: No Accession: 3:g.16019539A>C Codon: GTT/GGT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019539A>C Locations: - p.Val112Gly (EnsemblPlants:AT3G44340.1) - c.335T>G (EnsemblPlants:AT3G44340.1) - p.Val112Gly (EnsemblPlants:AT3G44340.4) - c.335T>G (EnsemblPlants:AT3G44340.4) - p.Val112Gly (EnsemblPlants:AT3G44340.3) - c.335T>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407359 | 114 | R>G | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.12) Somatic: No Accession: 3:g.16019534T>C Codon: AGA/GGA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019534T>C Locations: - p.Arg114Gly (EnsemblPlants:AT3G44340.1) - c.340A>G (EnsemblPlants:AT3G44340.1) - p.Arg114Gly (EnsemblPlants:AT3G44340.4) - c.340A>G (EnsemblPlants:AT3G44340.4) - p.Arg114Gly (EnsemblPlants:AT3G44340.3) - c.340A>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407357 | 116 | V>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.75) Somatic: No Accession: 3:g.16019527A>G Codon: GTT/GCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019527A>G Locations: - p.Val116Ala (EnsemblPlants:AT3G44340.1) - c.347T>C (EnsemblPlants:AT3G44340.1) - p.Val116Ala (EnsemblPlants:AT3G44340.4) - c.347T>C (EnsemblPlants:AT3G44340.4) - p.Val116Ala (EnsemblPlants:AT3G44340.3) - c.347T>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407358 | 116 | V>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.49) Somatic: No Accession: 3:g.16019528C>T Codon: GTT/ATT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019528C>T Locations: - p.Val116Ile (EnsemblPlants:AT3G44340.1) - c.346G>A (EnsemblPlants:AT3G44340.1) - p.Val116Ile (EnsemblPlants:AT3G44340.4) - c.346G>A (EnsemblPlants:AT3G44340.4) - p.Val116Ile (EnsemblPlants:AT3G44340.3) - c.346G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH08125191 | 118 | P>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.13) Somatic: No Accession: 3:g.16019521G>A Codon: CCA/CTA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019521G>A Locations: - p.Pro118Leu (EnsemblPlants:AT3G44340.1) - c.353C>T (EnsemblPlants:AT3G44340.1) - p.Pro118Leu (EnsemblPlants:AT3G44340.4) - c.353C>T (EnsemblPlants:AT3G44340.4) - p.Pro118Leu (EnsemblPlants:AT3G44340.3) - c.353C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396788 | 121 | N>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (1) Somatic: No Accession: 3:g.16019512T>C Codon: AAT/AGT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019512T>C Locations: - p.Asn121Ser (EnsemblPlants:AT3G44340.1) - c.362A>G (EnsemblPlants:AT3G44340.1) - p.Asn121Ser (EnsemblPlants:AT3G44340.4) - c.362A>G (EnsemblPlants:AT3G44340.4) - p.Asn121Ser (EnsemblPlants:AT3G44340.3) - c.362A>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019507_G_A | 123 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.18) Somatic: No Accession: 3:g.16019507G>A Codon: CCA/TCA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019507G>A Locations: - p.Pro123Ser (EnsemblPlants:AT3G44340.1) - c.367C>T (EnsemblPlants:AT3G44340.1) - p.Pro123Ser (EnsemblPlants:AT3G44340.4) - c.367C>T (EnsemblPlants:AT3G44340.4) - p.Pro123Ser (EnsemblPlants:AT3G44340.3) - c.367C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205657 | 124 | P>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.06) Somatic: No Accession: 3:g.16019503G>A Codon: CCG/CTG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019503G>A Locations: - p.Pro124Leu (EnsemblPlants:AT3G44340.1) - c.371C>T (EnsemblPlants:AT3G44340.1) - p.Pro124Leu (EnsemblPlants:AT3G44340.4) - c.371C>T (EnsemblPlants:AT3G44340.4) - p.Pro124Leu (EnsemblPlants:AT3G44340.3) - c.371C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407355 | 130 | S>F | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.62) Somatic: No Accession: 3:g.16019485G>A Codon: TCT/TTT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019485G>A Locations: - p.Ser130Phe (EnsemblPlants:AT3G44340.1) - c.389C>T (EnsemblPlants:AT3G44340.1) - p.Ser130Phe (EnsemblPlants:AT3G44340.4) - c.389C>T (EnsemblPlants:AT3G44340.4) - p.Ser130Phe (EnsemblPlants:AT3G44340.3) - c.389C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407356 | 130 | S>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.52) Somatic: No Accession: 3:g.16019486A>T Codon: TCT/ACT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019486A>T Locations: - p.Ser130Thr (EnsemblPlants:AT3G44340.1) - c.388T>A (EnsemblPlants:AT3G44340.1) - p.Ser130Thr (EnsemblPlants:AT3G44340.4) - c.388T>A (EnsemblPlants:AT3G44340.4) - p.Ser130Thr (EnsemblPlants:AT3G44340.3) - c.388T>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396786 | 139 | S>P | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.54) Somatic: No Accession: 3:g.16019459A>G Codon: TCG/CCG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019459A>G Locations: - p.Ser139Pro (EnsemblPlants:AT3G44340.1) - c.415T>C (EnsemblPlants:AT3G44340.1) - p.Ser139Pro (EnsemblPlants:AT3G44340.4) - c.415T>C (EnsemblPlants:AT3G44340.4) - p.Ser139Pro (EnsemblPlants:AT3G44340.3) - c.415T>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205656 | 142 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.18) Somatic: No Accession: 3:g.16019450G>A Codon: CCT/TCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019450G>A Locations: - p.Pro142Ser (EnsemblPlants:AT3G44340.1) - c.424C>T (EnsemblPlants:AT3G44340.1) - p.Pro142Ser (EnsemblPlants:AT3G44340.4) - c.424C>T (EnsemblPlants:AT3G44340.4) - p.Pro142Ser (EnsemblPlants:AT3G44340.3) - c.424C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019416_G_C | 153 | P>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.03) Somatic: No Accession: 3:g.16019416G>C Codon: CCA/CGA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019416G>C Locations: - p.Pro153Arg (EnsemblPlants:AT3G44340.1) - c.458C>G (EnsemblPlants:AT3G44340.1) - p.Pro153Arg (EnsemblPlants:AT3G44340.4) - c.458C>G (EnsemblPlants:AT3G44340.4) - p.Pro153Arg (EnsemblPlants:AT3G44340.3) - c.458C>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH14340636 | 159 | G>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.57) Somatic: No Accession: 3:g.16019398C>G Codon: GGT/GCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019398C>G Locations: - p.Gly159Ala (EnsemblPlants:AT3G44340.1) - c.476G>C (EnsemblPlants:AT3G44340.1) - p.Gly159Ala (EnsemblPlants:AT3G44340.4) - c.476G>C (EnsemblPlants:AT3G44340.4) - p.Gly159Ala (EnsemblPlants:AT3G44340.3) - c.476G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019393_G_A | 161 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.04) Somatic: No Accession: 3:g.16019393G>A Codon: CCT/TCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019393G>A Locations: - p.Pro161Ser (EnsemblPlants:AT3G44340.1) - c.481C>T (EnsemblPlants:AT3G44340.1) - p.Pro161Ser (EnsemblPlants:AT3G44340.4) - c.481C>T (EnsemblPlants:AT3G44340.4) - p.Pro161Ser (EnsemblPlants:AT3G44340.3) - c.481C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019337_C_A | 179 | M>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.41) Somatic: No Accession: 3:g.16019337C>A Codon: ATG/ATT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019337C>A Locations: - p.Met179Ile (EnsemblPlants:AT3G44340.1) - c.537G>T (EnsemblPlants:AT3G44340.1) - p.Met179Ile (EnsemblPlants:AT3G44340.4) - c.537G>T (EnsemblPlants:AT3G44340.4) - p.Met179Ile (EnsemblPlants:AT3G44340.3) - c.537G>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205655 | 187 | M>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.44) Somatic: No Accession: 3:g.16019313C>T Codon: ATG/ATA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019313C>T Locations: - p.Met187Ile (EnsemblPlants:AT3G44340.1) - c.561G>A (EnsemblPlants:AT3G44340.1) - p.Met187Ile (EnsemblPlants:AT3G44340.4) - c.561G>A (EnsemblPlants:AT3G44340.4) - p.Met187Ile (EnsemblPlants:AT3G44340.3) - c.561G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396744 | 191 | P>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.21) Somatic: No Accession: 3:g.16019302G>A Codon: CCG/CTG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019302G>A Locations: - p.Pro191Leu (EnsemblPlants:AT3G44340.1) - c.572C>T (EnsemblPlants:AT3G44340.1) - p.Pro191Leu (EnsemblPlants:AT3G44340.4) - c.572C>T (EnsemblPlants:AT3G44340.4) - p.Pro191Leu (EnsemblPlants:AT3G44340.3) - c.572C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205654 | 191 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.19) Somatic: No Accession: 3:g.16019303G>A Codon: CCG/TCG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019303G>A Locations: - p.Pro191Ser (EnsemblPlants:AT3G44340.1) - c.571C>T (EnsemblPlants:AT3G44340.1) - p.Pro191Ser (EnsemblPlants:AT3G44340.4) - c.571C>T (EnsemblPlants:AT3G44340.4) - p.Pro191Ser (EnsemblPlants:AT3G44340.3) - c.571C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019288_G_A | 196 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.15) Somatic: No Accession: 3:g.16019288G>A Codon: CCT/TCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019288G>A Locations: - p.Pro196Ser (EnsemblPlants:AT3G44340.1) - c.586C>T (EnsemblPlants:AT3G44340.1) - p.Pro196Ser (EnsemblPlants:AT3G44340.4) - c.586C>T (EnsemblPlants:AT3G44340.4) - p.Pro196Ser (EnsemblPlants:AT3G44340.3) - c.586C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH14340635 | 198 | P>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.29) Somatic: No Accession: 3:g.16019281G>A Codon: CCC/CTC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019281G>A Locations: - p.Pro198Leu (EnsemblPlants:AT3G44340.1) - c.593C>T (EnsemblPlants:AT3G44340.1) - p.Pro198Leu (EnsemblPlants:AT3G44340.4) - c.593C>T (EnsemblPlants:AT3G44340.4) - p.Pro198Leu (EnsemblPlants:AT3G44340.3) - c.593C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396743 | 202 | H>P | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.23) Somatic: No Accession: 3:g.16019269T>G Codon: CAT/CCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019269T>G Locations: - p.His202Pro (EnsemblPlants:AT3G44340.1) - c.605A>C (EnsemblPlants:AT3G44340.1) - p.His202Pro (EnsemblPlants:AT3G44340.4) - c.605A>C (EnsemblPlants:AT3G44340.4) - p.His202Pro (EnsemblPlants:AT3G44340.3) - c.605A>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205653 | 203 | G>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.81) Somatic: No Accession: 3:g.16019267C>T Codon: GGC/AGC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019267C>T Locations: - p.Gly203Ser (EnsemblPlants:AT3G44340.1) - c.607G>A (EnsemblPlants:AT3G44340.1) - p.Gly203Ser (EnsemblPlants:AT3G44340.4) - c.607G>A (EnsemblPlants:AT3G44340.4) - p.Gly203Ser (EnsemblPlants:AT3G44340.3) - c.607G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019264_C_T | 204 | G>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.35) Somatic: No Accession: 3:g.16019264C>T Codon: GGT/AGT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019264C>T Locations: - p.Gly204Ser (EnsemblPlants:AT3G44340.1) - c.610G>A (EnsemblPlants:AT3G44340.1) - p.Gly204Ser (EnsemblPlants:AT3G44340.4) - c.610G>A (EnsemblPlants:AT3G44340.4) - p.Gly204Ser (EnsemblPlants:AT3G44340.3) - c.610G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205652 | 205 | H>P | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.37) Somatic: No Accession: 3:g.16019260T>G Codon: CAT/CCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019260T>G Locations: - p.His205Pro (EnsemblPlants:AT3G44340.1) - c.614A>C (EnsemblPlants:AT3G44340.1) - p.His205Pro (EnsemblPlants:AT3G44340.4) - c.614A>C (EnsemblPlants:AT3G44340.4) - p.His205Pro (EnsemblPlants:AT3G44340.3) - c.614A>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205651 | 205 | H>Q | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.43) Somatic: No Accession: 3:g.16019259A>C Codon: CAT/CAG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019259A>C Locations: - p.His205Gln (EnsemblPlants:AT3G44340.1) - c.615T>G (EnsemblPlants:AT3G44340.1) - p.His205Gln (EnsemblPlants:AT3G44340.4) - c.615T>G (EnsemblPlants:AT3G44340.4) - p.His205Gln (EnsemblPlants:AT3G44340.3) - c.615T>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019261_G_A | 205 | H>Y | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (1) Somatic: No Accession: 3:g.16019261G>A Codon: CAT/TAT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019261G>A Locations: - p.His205Tyr (EnsemblPlants:AT3G44340.1) - c.613C>T (EnsemblPlants:AT3G44340.1) - p.His205Tyr (EnsemblPlants:AT3G44340.4) - c.613C>T (EnsemblPlants:AT3G44340.4) - p.His205Tyr (EnsemblPlants:AT3G44340.3) - c.613C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019243_G_A | 211 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.05) Somatic: No Accession: 3:g.16019243G>A Codon: CCT/TCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019243G>A Locations: - p.Pro211Ser (EnsemblPlants:AT3G44340.1) - c.631C>T (EnsemblPlants:AT3G44340.1) - p.Pro211Ser (EnsemblPlants:AT3G44340.4) - c.631C>T (EnsemblPlants:AT3G44340.4) - p.Pro211Ser (EnsemblPlants:AT3G44340.3) - c.631C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205649 | 214 | G>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.63) Somatic: No Accession: 3:g.16019233C>G Codon: GGC/GCC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019233C>G Locations: - p.Gly214Ala (EnsemblPlants:AT3G44340.1) - c.641G>C (EnsemblPlants:AT3G44340.1) - p.Gly214Ala (EnsemblPlants:AT3G44340.4) - c.641G>C (EnsemblPlants:AT3G44340.4) - p.Gly214Ala (EnsemblPlants:AT3G44340.3) - c.641G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205648 | 215 | M>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.41) Somatic: No Accession: 3:g.16019229C>T Codon: ATG/ATA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019229C>T Locations: - p.Met215Ile (EnsemblPlants:AT3G44340.1) - c.645G>A (EnsemblPlants:AT3G44340.1) - p.Met215Ile (EnsemblPlants:AT3G44340.4) - c.645G>A (EnsemblPlants:AT3G44340.4) - p.Met215Ile (EnsemblPlants:AT3G44340.3) - c.645G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205647 | 217 | G>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.57) Somatic: No Accession: 3:g.16019225C>T Codon: GGC/AGC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019225C>T Locations: - p.Gly217Ser (EnsemblPlants:AT3G44340.1) - c.649G>A (EnsemblPlants:AT3G44340.1) - p.Gly217Ser (EnsemblPlants:AT3G44340.4) - c.649G>A (EnsemblPlants:AT3G44340.4) - p.Gly217Ser (EnsemblPlants:AT3G44340.3) - c.649G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407354 | 219 | P>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.08) Somatic: No Accession: 3:g.16019219G>T Codon: CCG/ACG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019219G>T Locations: - p.Pro219Thr (EnsemblPlants:AT3G44340.1) - c.655C>A (EnsemblPlants:AT3G44340.1) - p.Pro219Thr (EnsemblPlants:AT3G44340.4) - c.655C>A (EnsemblPlants:AT3G44340.4) - p.Pro219Thr (EnsemblPlants:AT3G44340.3) - c.655C>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019201_G_A | 225 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.16) Somatic: No Accession: 3:g.16019201G>A Codon: CCT/TCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019201G>A Locations: - p.Pro225Ser (EnsemblPlants:AT3G44340.1) - c.673C>T (EnsemblPlants:AT3G44340.1) - p.Pro225Ser (EnsemblPlants:AT3G44340.4) - c.673C>T (EnsemblPlants:AT3G44340.4) - p.Pro225Ser (EnsemblPlants:AT3G44340.3) - c.673C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205644 | 227 | P>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.07) Somatic: No Accession: 3:g.16019194G>A Codon: CCG/CTG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019194G>A Locations: - p.Pro227Leu (EnsemblPlants:AT3G44340.1) - c.680C>T (EnsemblPlants:AT3G44340.1) - p.Pro227Leu (EnsemblPlants:AT3G44340.4) - c.680C>T (EnsemblPlants:AT3G44340.4) - p.Pro227Leu (EnsemblPlants:AT3G44340.3) - c.680C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205645 | 227 | P>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.14) Somatic: No Accession: 3:g.16019195G>T Codon: CCG/ACG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019195G>T Locations: - p.Pro227Thr (EnsemblPlants:AT3G44340.1) - c.679C>A (EnsemblPlants:AT3G44340.1) - p.Pro227Thr (EnsemblPlants:AT3G44340.4) - c.679C>A (EnsemblPlants:AT3G44340.4) - p.Pro227Thr (EnsemblPlants:AT3G44340.3) - c.679C>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396741 | 230 | G>D | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.07) Somatic: No Accession: 3:g.16019185C>T Codon: GGT/GAT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019185C>T Locations: - p.Gly230Asp (EnsemblPlants:AT3G44340.1) - c.689G>A (EnsemblPlants:AT3G44340.1) - p.Gly230Asp (EnsemblPlants:AT3G44340.4) - c.689G>A (EnsemblPlants:AT3G44340.4) - p.Gly230Asp (EnsemblPlants:AT3G44340.3) - c.689G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205643 | 230 | G>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.11) Somatic: No Accession: 3:g.16019186C>G Codon: GGT/CGT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019186C>G Locations: - p.Gly230Arg (EnsemblPlants:AT3G44340.1) - c.688G>C (EnsemblPlants:AT3G44340.1) - p.Gly230Arg (EnsemblPlants:AT3G44340.4) - c.688G>C (EnsemblPlants:AT3G44340.4) - p.Gly230Arg (EnsemblPlants:AT3G44340.3) - c.688G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205642 | 232 | G>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.48) Somatic: No Accession: 3:g.16019180C>G Codon: GGG/CGG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019180C>G Locations: - p.Gly232Arg (EnsemblPlants:AT3G44340.1) - c.694G>C (EnsemblPlants:AT3G44340.1) - p.Gly232Arg (EnsemblPlants:AT3G44340.4) - c.694G>C (EnsemblPlants:AT3G44340.4) - p.Gly232Arg (EnsemblPlants:AT3G44340.3) - c.694G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205641 | 233 | A>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.52) Somatic: No Accession: 3:g.16019177C>T Codon: GCA/ACA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019177C>T Locations: - p.Ala233Thr (EnsemblPlants:AT3G44340.1) - c.697G>A (EnsemblPlants:AT3G44340.1) - p.Ala233Thr (EnsemblPlants:AT3G44340.4) - c.697G>A (EnsemblPlants:AT3G44340.4) - p.Ala233Thr (EnsemblPlants:AT3G44340.3) - c.697G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019159_G_T | 239 | Q>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.63) Somatic: No Accession: 3:g.16019159G>T Codon: CAA/AAA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019159G>T Locations: - p.Gln239Lys (EnsemblPlants:AT3G44340.1) - c.715C>A (EnsemblPlants:AT3G44340.1) - p.Gln239Lys (EnsemblPlants:AT3G44340.4) - c.715C>A (EnsemblPlants:AT3G44340.4) - p.Gln239Lys (EnsemblPlants:AT3G44340.3) - c.715C>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH14340574 | 240 | F>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.41) Somatic: No Accession: 3:g.16019155A>G Codon: TTC/TCC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019155A>G Locations: - p.Phe240Ser (EnsemblPlants:AT3G44340.1) - c.719T>C (EnsemblPlants:AT3G44340.1) - p.Phe240Ser (EnsemblPlants:AT3G44340.4) - c.719T>C (EnsemblPlants:AT3G44340.4) - p.Phe240Ser (EnsemblPlants:AT3G44340.3) - c.719T>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019120_A_T | 252 | Y>N | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.29) Somatic: No Accession: 3:g.16019120A>T Codon: TAT/AAT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019120A>T Locations: - p.Tyr252Asn (EnsemblPlants:AT3G44340.1) - c.754T>A (EnsemblPlants:AT3G44340.1) - p.Tyr252Asn (EnsemblPlants:AT3G44340.4) - c.754T>A (EnsemblPlants:AT3G44340.4) - p.Tyr252Asn (EnsemblPlants:AT3G44340.3) - c.754T>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019111_G_A | 255 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.14) Somatic: No Accession: 3:g.16019111G>A Codon: CCT/TCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019111G>A Locations: - p.Pro255Ser (EnsemblPlants:AT3G44340.1) - c.763C>T (EnsemblPlants:AT3G44340.1) - p.Pro255Ser (EnsemblPlants:AT3G44340.4) - c.763C>T (EnsemblPlants:AT3G44340.4) - p.Pro255Ser (EnsemblPlants:AT3G44340.3) - c.763C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205640 | 258 | A>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (0.29) Somatic: No Accession: 3:g.16019101G>A Codon: GCA/GTA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019101G>A Locations: - p.Ala258Val (EnsemblPlants:AT3G44340.1) - c.773C>T (EnsemblPlants:AT3G44340.1) - p.Ala258Val (EnsemblPlants:AT3G44340.4) - c.773C>T (EnsemblPlants:AT3G44340.4) - p.Ala258Val (EnsemblPlants:AT3G44340.3) - c.773C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407351 | 261 | F>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.75) Somatic: No Accession: 3:g.16019091A>T Codon: TTT/TTA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019091A>T Locations: - p.Phe261Leu (EnsemblPlants:AT3G44340.1) - c.783T>A (EnsemblPlants:AT3G44340.1) - p.Phe261Leu (EnsemblPlants:AT3G44340.4) - c.783T>A (EnsemblPlants:AT3G44340.4) - p.Phe261Leu (EnsemblPlants:AT3G44340.3) - c.783T>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407350 | 265 | S>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.41) Somatic: No Accession: 3:g.16019080G>A Codon: TCA/TTA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019080G>A Locations: - p.Ser265Leu (EnsemblPlants:AT3G44340.1) - c.794C>T (EnsemblPlants:AT3G44340.1) - p.Ser265Leu (EnsemblPlants:AT3G44340.4) - c.794C>T (EnsemblPlants:AT3G44340.4) - p.Ser265Leu (EnsemblPlants:AT3G44340.3) - c.794C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019078_G_A | 266 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.21) Somatic: No Accession: 3:g.16019078G>A Codon: CCA/TCA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019078G>A Locations: - p.Pro266Ser (EnsemblPlants:AT3G44340.1) - c.796C>T (EnsemblPlants:AT3G44340.1) - p.Pro266Ser (EnsemblPlants:AT3G44340.4) - c.796C>T (EnsemblPlants:AT3G44340.4) - p.Pro266Ser (EnsemblPlants:AT3G44340.3) - c.796C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205639 | 275 | I>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.44) Somatic: No Accession: 3:g.16019050A>G Codon: ATA/ACA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019050A>G Locations: - p.Ile275Thr (EnsemblPlants:AT3G44340.1) - c.824T>C (EnsemblPlants:AT3G44340.1) - p.Ile275Thr (EnsemblPlants:AT3G44340.4) - c.824T>C (EnsemblPlants:AT3G44340.4) - p.Ile275Thr (EnsemblPlants:AT3G44340.3) - c.824T>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396739 | 276 | P>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.59) Somatic: No Accession: 3:g.16019048G>C Codon: CCC/GCC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019048G>C Locations: - p.Pro276Ala (EnsemblPlants:AT3G44340.1) - c.826C>G (EnsemblPlants:AT3G44340.1) - p.Pro276Ala (EnsemblPlants:AT3G44340.4) - c.826C>G (EnsemblPlants:AT3G44340.4) - p.Pro276Ala (EnsemblPlants:AT3G44340.3) - c.826C>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407349 | 277 | P>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.11) Somatic: No Accession: 3:g.16019045G>C Codon: CCG/GCG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019045G>C Locations: - p.Pro277Ala (EnsemblPlants:AT3G44340.1) - c.829C>G (EnsemblPlants:AT3G44340.1) - p.Pro277Ala (EnsemblPlants:AT3G44340.4) - c.829C>G (EnsemblPlants:AT3G44340.4) - p.Pro277Ala (EnsemblPlants:AT3G44340.3) - c.829C>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019044_G_A | 277 | P>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16019044G>A Codon: CCG/CTG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019044G>A Locations: - p.Pro277Leu (EnsemblPlants:AT3G44340.1) - c.830C>T (EnsemblPlants:AT3G44340.1) - p.Pro277Leu (EnsemblPlants:AT3G44340.4) - c.830C>T (EnsemblPlants:AT3G44340.4) - p.Pro277Leu (EnsemblPlants:AT3G44340.3) - c.830C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019035_T_A | 280 | N>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.22) Somatic: No Accession: 3:g.16019035T>A Codon: AAT/ATT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019035T>A Locations: - p.Asn280Ile (EnsemblPlants:AT3G44340.1) - c.839A>T (EnsemblPlants:AT3G44340.1) - p.Asn280Ile (EnsemblPlants:AT3G44340.4) - c.839A>T (EnsemblPlants:AT3G44340.4) - p.Asn280Ile (EnsemblPlants:AT3G44340.3) - c.839A>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16019001_C_T | 291 | M>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.43) Somatic: No Accession: 3:g.16019001C>T Codon: ATG/ATA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16019001C>T Locations: - p.Met291Ile (EnsemblPlants:AT3G44340.1) - c.873G>A (EnsemblPlants:AT3G44340.1) - p.Met291Ile (EnsemblPlants:AT3G44340.4) - c.873G>A (EnsemblPlants:AT3G44340.4) - p.Met291Ile (EnsemblPlants:AT3G44340.3) - c.873G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205637 | 292 | P>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.08) Somatic: No Accession: 3:g.16018999G>A Codon: CCA/CTA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018999G>A Locations: - p.Pro292Leu (EnsemblPlants:AT3G44340.1) - c.875C>T (EnsemblPlants:AT3G44340.1) - p.Pro292Leu (EnsemblPlants:AT3G44340.4) - c.875C>T (EnsemblPlants:AT3G44340.4) - p.Pro292Leu (EnsemblPlants:AT3G44340.3) - c.875C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205636 | 302 | Q>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.45) Somatic: No Accession: 3:g.16018969T>C Codon: CAA/CGA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018969T>C Locations: - p.Gln302Arg (EnsemblPlants:AT3G44340.1) - c.905A>G (EnsemblPlants:AT3G44340.1) - p.Gln302Arg (EnsemblPlants:AT3G44340.4) - c.905A>G (EnsemblPlants:AT3G44340.4) - p.Gln302Arg (EnsemblPlants:AT3G44340.3) - c.905A>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396701 | 307 | A>P | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.76) Somatic: No Accession: 3:g.16018655C>G Codon: GCT/CCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018655C>G Locations: - p.Ala307Pro (EnsemblPlants:AT3G44340.1) - c.919G>C (EnsemblPlants:AT3G44340.1) - p.Ala307Pro (EnsemblPlants:AT3G44340.4) - c.919G>C (EnsemblPlants:AT3G44340.4) - p.Ala307Pro (EnsemblPlants:AT3G44340.3) - c.919G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16018649_C_T | 309 | G>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.5) Somatic: No Accession: 3:g.16018649C>T Codon: GGC/AGC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018649C>T Locations: - p.Gly309Ser (EnsemblPlants:AT3G44340.1) - c.925G>A (EnsemblPlants:AT3G44340.1) - p.Gly309Ser (EnsemblPlants:AT3G44340.4) - c.925G>A (EnsemblPlants:AT3G44340.4) - p.Gly309Ser (EnsemblPlants:AT3G44340.3) - c.925G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16018634_T_C | 314 | I>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.59) Somatic: No Accession: 3:g.16018634T>C Codon: ATC/GTC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018634T>C Locations: - p.Ile314Val (EnsemblPlants:AT3G44340.1) - c.940A>G (EnsemblPlants:AT3G44340.1) - p.Ile314Val (EnsemblPlants:AT3G44340.4) - c.940A>G (EnsemblPlants:AT3G44340.4) - p.Ile314Val (EnsemblPlants:AT3G44340.3) - c.940A>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16018614_C_G | 320 | M>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.36) Somatic: No Accession: 3:g.16018614C>G Codon: ATG/ATC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018614C>G Locations: - p.Met320Ile (EnsemblPlants:AT3G44340.1) - c.960G>C (EnsemblPlants:AT3G44340.1) - p.Met320Ile (EnsemblPlants:AT3G44340.4) - c.960G>C (EnsemblPlants:AT3G44340.4) - p.Met320Ile (EnsemblPlants:AT3G44340.3) - c.960G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16018541_T_A | 345 | S>C | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.03) Somatic: No Accession: 3:g.16018541T>A Codon: AGC/TGC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018541T>A Locations: - p.Ser345Cys (EnsemblPlants:AT3G44340.1) - c.1033A>T (EnsemblPlants:AT3G44340.1) - p.Ser345Cys (EnsemblPlants:AT3G44340.4) - c.1033A>T (EnsemblPlants:AT3G44340.4) - p.Ser345Cys (EnsemblPlants:AT3G44340.3) - c.1033A>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16018535_T_A | 347 | S>C | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16018535T>A Codon: AGT/TGT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018535T>A Locations: - p.Ser347Cys (EnsemblPlants:AT3G44340.1) - c.1039A>T (EnsemblPlants:AT3G44340.1) - p.Ser347Cys (EnsemblPlants:AT3G44340.4) - c.1039A>T (EnsemblPlants:AT3G44340.4) - p.Ser347Cys (EnsemblPlants:AT3G44340.3) - c.1039A>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16018508_C_T | 356 | E>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.3) Somatic: No Accession: 3:g.16018508C>T Codon: GAA/AAA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018508C>T Locations: - p.Glu356Lys (EnsemblPlants:AT3G44340.1) - c.1066G>A (EnsemblPlants:AT3G44340.1) - p.Glu356Lys (EnsemblPlants:AT3G44340.4) - c.1066G>A (EnsemblPlants:AT3G44340.4) - p.Glu356Lys (EnsemblPlants:AT3G44340.3) - c.1066G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205624 | 371 | T>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.21) Somatic: No Accession: 3:g.16018360T>C Codon: ACT/GCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018360T>C Locations: - p.Thr371Ala (EnsemblPlants:AT3G44340.1) - c.1111A>G (EnsemblPlants:AT3G44340.1) - p.Thr371Ala (EnsemblPlants:AT3G44340.4) - c.1111A>G (EnsemblPlants:AT3G44340.4) - p.Thr371Ala (EnsemblPlants:AT3G44340.3) - c.1111A>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16018197_T_A | 392 | T>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.09) Somatic: No Accession: 3:g.16018197T>A Codon: ACT/TCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018197T>A Locations: - p.Thr392Ser (EnsemblPlants:AT3G44340.1) - c.1174A>T (EnsemblPlants:AT3G44340.1) - p.Thr392Ser (EnsemblPlants:AT3G44340.4) - c.1174A>T (EnsemblPlants:AT3G44340.4) - p.Thr392Ser (EnsemblPlants:AT3G44340.3) - c.1174A>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH09424635 | 405 | L>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.18) Somatic: No Accession: 3:g.16018158G>C Codon: CTA/GTA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018158G>C Locations: - p.Leu405Val (EnsemblPlants:AT3G44340.1) - c.1213C>G (EnsemblPlants:AT3G44340.1) - p.Leu405Val (EnsemblPlants:AT3G44340.4) - c.1213C>G (EnsemblPlants:AT3G44340.4) - p.Leu405Val (EnsemblPlants:AT3G44340.3) - c.1213C>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407325 | 410 | M>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (1) Somatic: No Accession: 3:g.16018143T>A Codon: ATG/TTG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16018143T>A Locations: - p.Met410Leu (EnsemblPlants:AT3G44340.1) - c.1228A>T (EnsemblPlants:AT3G44340.1) - p.Met410Leu (EnsemblPlants:AT3G44340.4) - c.1228A>T (EnsemblPlants:AT3G44340.4) - p.Met410Leu (EnsemblPlants:AT3G44340.3) - c.1228A>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16017477_C_G | 463 | E>Q | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.05) Somatic: No Accession: 3:g.16017477C>G Codon: GAG/CAG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16017477C>G Locations: - p.Glu463Gln (EnsemblPlants:AT3G44340.1) - c.1387G>C (EnsemblPlants:AT3G44340.1) - p.Glu463Gln (EnsemblPlants:AT3G44340.4) - c.1387G>C (EnsemblPlants:AT3G44340.4) - p.Glu463Gln (EnsemblPlants:AT3G44340.3) - c.1387G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396661 | 466 | R>C | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16017468G>A Codon: CGT/TGT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16017468G>A Locations: - p.Arg466Cys (EnsemblPlants:AT3G44340.1) - c.1396C>T (EnsemblPlants:AT3G44340.1) - p.Arg466Cys (EnsemblPlants:AT3G44340.4) - c.1396C>T (EnsemblPlants:AT3G44340.4) - p.Arg466Cys (EnsemblPlants:AT3G44340.3) - c.1396C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16017465_C_G | 467 | D>H | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.16) Somatic: No Accession: 3:g.16017465C>G Codon: GAC/CAC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16017465C>G Locations: - p.Asp467His (EnsemblPlants:AT3G44340.1) - c.1399G>C (EnsemblPlants:AT3G44340.1) - p.Asp467His (EnsemblPlants:AT3G44340.4) - c.1399G>C (EnsemblPlants:AT3G44340.4) - p.Asp467His (EnsemblPlants:AT3G44340.3) - c.1399G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205602 | 501 | M>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.07) Somatic: No Accession: 3:g.16017362A>G Codon: ATG/ACG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16017362A>G Locations: - p.Met501Thr (EnsemblPlants:AT3G44340.1) - c.1502T>C (EnsemblPlants:AT3G44340.1) - p.Met501Thr (EnsemblPlants:AT3G44340.4) - c.1502T>C (EnsemblPlants:AT3G44340.4) - p.Met501Thr (EnsemblPlants:AT3G44340.3) - c.1502T>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16016939_C_A | 518 | M>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.07) Somatic: No Accession: 3:g.16016939C>A Codon: ATG/ATT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016939C>A Locations: - p.Met518Ile (EnsemblPlants:AT3G44340.1) - c.1554G>T (EnsemblPlants:AT3G44340.1) - p.Met518Ile (EnsemblPlants:AT3G44340.4) - c.1554G>T (EnsemblPlants:AT3G44340.4) - p.Met518Ile (EnsemblPlants:AT3G44340.3) - c.1554G>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16016937_T_C | 519 | N>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.04) Somatic: No Accession: 3:g.16016937T>C Codon: AAC/AGC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016937T>C Locations: - p.Asn519Ser (EnsemblPlants:AT3G44340.1) - c.1556A>G (EnsemblPlants:AT3G44340.1) - p.Asn519Ser (EnsemblPlants:AT3G44340.4) - c.1556A>G (EnsemblPlants:AT3G44340.4) - p.Asn519Ser (EnsemblPlants:AT3G44340.3) - c.1556A>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205591 | 520 | A>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16016935C>T Codon: GCG/ACG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016935C>T Locations: - p.Ala520Thr (EnsemblPlants:AT3G44340.1) - c.1558G>A (EnsemblPlants:AT3G44340.1) - p.Ala520Thr (EnsemblPlants:AT3G44340.4) - c.1558G>A (EnsemblPlants:AT3G44340.4) - p.Ala520Thr (EnsemblPlants:AT3G44340.3) - c.1558G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16016919_G_A | 525 | A>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.09) Somatic: No Accession: 3:g.16016919G>A Codon: GCA/GTA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016919G>A Locations: - p.Ala525Val (EnsemblPlants:AT3G44340.1) - c.1574C>T (EnsemblPlants:AT3G44340.1) - p.Ala525Val (EnsemblPlants:AT3G44340.4) - c.1574C>T (EnsemblPlants:AT3G44340.4) - p.Ala525Val (EnsemblPlants:AT3G44340.3) - c.1574C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205590 | 529 | A>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.02) Somatic: No Accession: 3:g.16016908C>T Codon: GCT/ACT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016908C>T Locations: - p.Ala529Thr (EnsemblPlants:AT3G44340.1) - c.1585G>A (EnsemblPlants:AT3G44340.1) - p.Ala529Thr (EnsemblPlants:AT3G44340.4) - c.1585G>A (EnsemblPlants:AT3G44340.4) - p.Ala529Thr (EnsemblPlants:AT3G44340.3) - c.1585G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16016905_A_T | 530 | C>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16016905A>T Codon: TGC/AGC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016905A>T Locations: - p.Cys530Ser (EnsemblPlants:AT3G44340.1) - c.1588T>A (EnsemblPlants:AT3G44340.1) - p.Cys530Ser (EnsemblPlants:AT3G44340.4) - c.1588T>A (EnsemblPlants:AT3G44340.4) - p.Cys530Ser (EnsemblPlants:AT3G44340.3) - c.1588T>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16016901_C_T | 531 | S>N | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.06) Somatic: No Accession: 3:g.16016901C>T Codon: AGT/AAT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016901C>T Locations: - p.Ser531Asn (EnsemblPlants:AT3G44340.1) - c.1592G>A (EnsemblPlants:AT3G44340.1) - p.Ser531Asn (EnsemblPlants:AT3G44340.4) - c.1592G>A (EnsemblPlants:AT3G44340.4) - p.Ser531Asn (EnsemblPlants:AT3G44340.3) - c.1592G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16016893_G_T | 534 | Q>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.34) Somatic: No Accession: 3:g.16016893G>T Codon: CAG/AAG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016893G>T Locations: - p.Gln534Lys (EnsemblPlants:AT3G44340.1) - c.1600C>A (EnsemblPlants:AT3G44340.1) - p.Gln534Lys (EnsemblPlants:AT3G44340.4) - c.1600C>A (EnsemblPlants:AT3G44340.4) - p.Gln534Lys (EnsemblPlants:AT3G44340.3) - c.1600C>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16016888_T_A | 535 | Q>H | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.01) Somatic: No Accession: 3:g.16016888T>A Codon: CAA/CAT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016888T>A Locations: - p.Gln535His (EnsemblPlants:AT3G44340.1) - c.1605A>T (EnsemblPlants:AT3G44340.1) - p.Gln535His (EnsemblPlants:AT3G44340.4) - c.1605A>T (EnsemblPlants:AT3G44340.4) - p.Gln535His (EnsemblPlants:AT3G44340.3) - c.1605A>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407292 | 544 | P>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16016693G>C Codon: CCT/CGT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016693G>C Locations: - p.Pro544Arg (EnsemblPlants:AT3G44340.1) - c.1631C>G (EnsemblPlants:AT3G44340.1) - p.Pro544Arg (EnsemblPlants:AT3G44340.4) - c.1631C>G (EnsemblPlants:AT3G44340.4) - p.Pro544Arg (EnsemblPlants:AT3G44340.3) - c.1631C>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205587 | 559 | F>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16016648A>G Codon: TTT/TCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016648A>G Locations: - p.Phe559Ser (EnsemblPlants:AT3G44340.1) - c.1676T>C (EnsemblPlants:AT3G44340.1) - p.Phe559Ser (EnsemblPlants:AT3G44340.4) - c.1676T>C (EnsemblPlants:AT3G44340.4) - p.Phe559Ser (EnsemblPlants:AT3G44340.3) - c.1676T>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16016278_T_A | 586 | T>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.47) Somatic: No Accession: 3:g.16016278T>A Codon: ACA/TCA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016278T>A Locations: - p.Thr586Ser (EnsemblPlants:AT3G44340.1) - c.1756A>T (EnsemblPlants:AT3G44340.1) - p.Thr586Ser (EnsemblPlants:AT3G44340.4) - c.1756A>T (EnsemblPlants:AT3G44340.4) - p.Thr586Ser (EnsemblPlants:AT3G44340.3) - c.1756A>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16016104_G_T | 611 | Q>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.15) Somatic: No Accession: 3:g.16016104G>T Codon: CAG/AAG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016104G>T Locations: - p.Gln611Lys (EnsemblPlants:AT3G44340.1) - c.1831C>A (EnsemblPlants:AT3G44340.1) - p.Gln611Lys (EnsemblPlants:AT3G44340.4) - c.1831C>A (EnsemblPlants:AT3G44340.4) - p.Gln611Lys (EnsemblPlants:AT3G44340.3) - c.1831C>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16016094_T_G | 614 | K>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.07) Somatic: No Accession: 3:g.16016094T>G Codon: AAG/ACG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016094T>G Locations: - p.Lys614Thr (EnsemblPlants:AT3G44340.1) - c.1841A>C (EnsemblPlants:AT3G44340.1) - p.Lys614Thr (EnsemblPlants:AT3G44340.4) - c.1841A>C (EnsemblPlants:AT3G44340.4) - p.Lys614Thr (EnsemblPlants:AT3G44340.3) - c.1841A>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16016092_T_G | 615 | S>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.22) Somatic: No Accession: 3:g.16016092T>G Codon: AGT/CGT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016092T>G Locations: - p.Ser615Arg (EnsemblPlants:AT3G44340.1) - c.1843A>C (EnsemblPlants:AT3G44340.1) - p.Ser615Arg (EnsemblPlants:AT3G44340.4) - c.1843A>C (EnsemblPlants:AT3G44340.4) - p.Ser615Arg (EnsemblPlants:AT3G44340.3) - c.1843A>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16016086_C_T | 617 | E>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.02) Somatic: No Accession: 3:g.16016086C>T Codon: GAA/AAA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16016086C>T Locations: - p.Glu617Lys (EnsemblPlants:AT3G44340.1) - c.1849G>A (EnsemblPlants:AT3G44340.1) - p.Glu617Lys (EnsemblPlants:AT3G44340.4) - c.1849G>A (EnsemblPlants:AT3G44340.4) - p.Glu617Lys (EnsemblPlants:AT3G44340.3) - c.1849G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16015786_C_A | 630 | A>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.01) Somatic: No Accession: 3:g.16015786C>A Codon: GCG/TCG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16015786C>A Locations: - p.Ala630Ser (EnsemblPlants:AT3G44340.1) - c.1888G>T (EnsemblPlants:AT3G44340.1) - p.Ala630Ser (EnsemblPlants:AT3G44340.4) - c.1888G>T (EnsemblPlants:AT3G44340.4) - p.Ala630Ser (EnsemblPlants:AT3G44340.3) - c.1888G>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16015773_G_A | 634 | T>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.07) Somatic: No Accession: 3:g.16015773G>A Codon: ACT/ATT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16015773G>A Locations: - p.Thr634Ile (EnsemblPlants:AT3G44340.1) - c.1901C>T (EnsemblPlants:AT3G44340.1) - p.Thr634Ile (EnsemblPlants:AT3G44340.4) - c.1901C>T (EnsemblPlants:AT3G44340.4) - p.Thr634Ile (EnsemblPlants:AT3G44340.3) - c.1901C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205570 | 638 | L>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.15) Somatic: No Accession: 3:g.16015762G>C Codon: CTC/GTC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16015762G>C Locations: - p.Leu638Val (EnsemblPlants:AT3G44340.1) - c.1912C>G (EnsemblPlants:AT3G44340.1) - p.Leu638Val (EnsemblPlants:AT3G44340.4) - c.1912C>G (EnsemblPlants:AT3G44340.4) - p.Leu638Val (EnsemblPlants:AT3G44340.3) - c.1912C>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH14340509 | 650 | I>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.13) Somatic: No Accession: 3:g.16015542A>G Codon: ATT/ACT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16015542A>G Locations: - p.Ile650Thr (EnsemblPlants:AT3G44340.1) - c.1949T>C (EnsemblPlants:AT3G44340.1) - p.Ile650Thr (EnsemblPlants:AT3G44340.4) - c.1949T>C (EnsemblPlants:AT3G44340.4) - p.Ile650Thr (EnsemblPlants:AT3G44340.3) - c.1949T>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16015501_C_T | 664 | A>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.84) Somatic: No Accession: 3:g.16015501C>T Codon: GCC/ACC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16015501C>T Locations: - p.Ala664Thr (EnsemblPlants:AT3G44340.1) - c.1990G>A (EnsemblPlants:AT3G44340.1) - p.Ala664Thr (EnsemblPlants:AT3G44340.4) - c.1990G>A (EnsemblPlants:AT3G44340.4) - p.Ala664Thr (EnsemblPlants:AT3G44340.3) - c.1990G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16015046_C_T | 706 | V>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.2) Somatic: No Accession: 3:g.16015046C>T Codon: GTT/ATT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16015046C>T Locations: - p.Val706Ile (EnsemblPlants:AT3G44340.1) - c.2116G>A (EnsemblPlants:AT3G44340.1) - p.Val706Ile (EnsemblPlants:AT3G44340.4) - c.2116G>A (EnsemblPlants:AT3G44340.4) - p.Val706Ile (EnsemblPlants:AT3G44340.3) - c.2116G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407262 | 708 | M>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (1) Somatic: No Accession: 3:g.16015038C>T Codon: ATG/ATA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16015038C>T Locations: - p.Met708Ile (EnsemblPlants:AT3G44340.1) - c.2124G>A (EnsemblPlants:AT3G44340.1) - p.Met708Ile (EnsemblPlants:AT3G44340.4) - c.2124G>A (EnsemblPlants:AT3G44340.4) - p.Met708Ile (EnsemblPlants:AT3G44340.3) - c.2124G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16014612_T_G | 736 | K>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16014612T>G Codon: AAG/ACG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16014612T>G Locations: - p.Lys736Thr (EnsemblPlants:AT3G44340.1) - c.2207A>C (EnsemblPlants:AT3G44340.1) - p.Lys736Thr (EnsemblPlants:AT3G44340.4) - c.2207A>C (EnsemblPlants:AT3G44340.4) - p.Lys736Thr (EnsemblPlants:AT3G44340.3) - c.2207A>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16014610_A_C | 737 | L>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16014610A>C Codon: TTA/GTA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16014610A>C Locations: - p.Leu737Val (EnsemblPlants:AT3G44340.1) - c.2209T>G (EnsemblPlants:AT3G44340.1) - p.Leu737Val (EnsemblPlants:AT3G44340.4) - c.2209T>G (EnsemblPlants:AT3G44340.4) - p.Leu737Val (EnsemblPlants:AT3G44340.3) - c.2209T>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16014606_T_A | 738 | Y>F | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.25) Somatic: No Accession: 3:g.16014606T>A Codon: TAC/TTC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16014606T>A Locations: - p.Tyr738Phe (EnsemblPlants:AT3G44340.1) - c.2213A>T (EnsemblPlants:AT3G44340.1) - p.Tyr738Phe (EnsemblPlants:AT3G44340.4) - c.2213A>T (EnsemblPlants:AT3G44340.4) - p.Tyr738Phe (EnsemblPlants:AT3G44340.3) - c.2213A>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205538 | 740 | D>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16014600T>A Codon: GAT/GTT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16014600T>A Locations: - p.Asp740Val (EnsemblPlants:AT3G44340.1) - c.2219A>T (EnsemblPlants:AT3G44340.1) - p.Asp740Val (EnsemblPlants:AT3G44340.4) - c.2219A>T (EnsemblPlants:AT3G44340.4) - p.Asp740Val (EnsemblPlants:AT3G44340.3) - c.2219A>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH14340463 | 746 | T>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.27) Somatic: No Accession: 3:g.16014583T>A Codon: ACG/TCG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16014583T>A Locations: - p.Thr746Ser (EnsemblPlants:AT3G44340.1) - c.2236A>T (EnsemblPlants:AT3G44340.1) - p.Thr746Ser (EnsemblPlants:AT3G44340.4) - c.2236A>T (EnsemblPlants:AT3G44340.4) - p.Thr746Ser (EnsemblPlants:AT3G44340.3) - c.2236A>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16014382_G_A | 784 | A>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.09) Somatic: No Accession: 3:g.16014382G>A Codon: GCG/GTG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16014382G>A Locations: - p.Ala784Val (EnsemblPlants:AT3G44340.1) - c.2351C>T (EnsemblPlants:AT3G44340.1) - p.Ala784Val (EnsemblPlants:AT3G44340.4) - c.2351C>T (EnsemblPlants:AT3G44340.4) - p.Ala784Val (EnsemblPlants:AT3G44340.3) - c.2351C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16013909_G_A | 813 | L>F | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16013909G>A Codon: CTT/TTT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16013909G>A Locations: - p.Leu813Phe (EnsemblPlants:AT3G44340.1) - c.2437C>T (EnsemblPlants:AT3G44340.1) - p.Leu813Phe (EnsemblPlants:AT3G44340.4) - c.2437C>T (EnsemblPlants:AT3G44340.4) - p.Leu813Phe (EnsemblPlants:AT3G44340.3) - c.2437C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16013858_A_C | 830 | S>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.47) Somatic: No Accession: 3:g.16013858A>C Codon: TCA/GCA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16013858A>C Locations: - p.Ser830Ala (EnsemblPlants:AT3G44340.1) - c.2488T>G (EnsemblPlants:AT3G44340.1) - p.Ser830Ala (EnsemblPlants:AT3G44340.4) - c.2488T>G (EnsemblPlants:AT3G44340.4) - p.Ser830Ala (EnsemblPlants:AT3G44340.3) - c.2488T>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396407 | 852 | C>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.16) Somatic: No Accession: 3:g.16013791C>G Codon: TGT/TCT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16013791C>G Locations: - p.Cys852Ser (EnsemblPlants:AT3G44340.1) - c.2555G>C (EnsemblPlants:AT3G44340.1) - p.Cys852Ser (EnsemblPlants:AT3G44340.4) - c.2555G>C (EnsemblPlants:AT3G44340.4) - p.Cys852Ser (EnsemblPlants:AT3G44340.3) - c.2555G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16013655_T_A | 860 | E>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.11) Somatic: No Accession: 3:g.16013655T>A Codon: GAG/GTG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16013655T>A Locations: - p.Glu860Val (EnsemblPlants:AT3G44340.1) - c.2579A>T (EnsemblPlants:AT3G44340.1) - p.Glu860Val (EnsemblPlants:AT3G44340.4) - c.2579A>T (EnsemblPlants:AT3G44340.4) - p.Glu860Val (EnsemblPlants:AT3G44340.3) - c.2579A>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396371 | 902 | A>P | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.01) Somatic: No Accession: 3:g.16013530C>G Codon: GCA/CCA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16013530C>G Locations: - p.Ala902Pro (EnsemblPlants:AT3G44340.1) - c.2704G>C (EnsemblPlants:AT3G44340.1) - p.Ala902Pro (EnsemblPlants:AT3G44340.4) - c.2704G>C (EnsemblPlants:AT3G44340.4) - p.Ala902Pro (EnsemblPlants:AT3G44340.3) - c.2704G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16013083_C_T | 923 | G>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.02) Somatic: No Accession: 3:g.16013083C>T Codon: GGG/AGG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16013083C>T Locations: - p.Gly923Arg (EnsemblPlants:AT3G44340.1) - c.2767G>A (EnsemblPlants:AT3G44340.1) - p.Gly923Arg (EnsemblPlants:AT3G44340.4) - c.2767G>A (EnsemblPlants:AT3G44340.4) - p.Gly923Arg (EnsemblPlants:AT3G44340.3) - c.2767G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407180 | 970 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.4) Somatic: No Accession: 3:g.16012854G>A Codon: CCA/TCA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16012854G>A Locations: - p.Pro970Ser (EnsemblPlants:AT3G44340.1) - c.2908C>T (EnsemblPlants:AT3G44340.1) - p.Pro970Ser (EnsemblPlants:AT3G44340.4) - c.2908C>T (EnsemblPlants:AT3G44340.4) - p.Pro970Ser (EnsemblPlants:AT3G44340.3) - c.2908C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205499 | 975 | S>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16012837A>C Codon: AGT/AGG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16012837A>C Locations: - p.Ser975Arg (EnsemblPlants:AT3G44340.1) - c.2925T>G (EnsemblPlants:AT3G44340.1) - p.Ser975Arg (EnsemblPlants:AT3G44340.4) - c.2925T>G (EnsemblPlants:AT3G44340.4) - p.Ser975Arg (EnsemblPlants:AT3G44340.3) - c.2925T>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH14340422 | 981 | E>D | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (1) Somatic: No Accession: 3:g.16012819C>G Codon: GAG/GAC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16012819C>G Locations: - p.Glu981Asp (EnsemblPlants:AT3G44340.1) - c.2943G>C (EnsemblPlants:AT3G44340.1) - p.Glu981Asp (EnsemblPlants:AT3G44340.4) - c.2943G>C (EnsemblPlants:AT3G44340.4) - p.Glu981Asp (EnsemblPlants:AT3G44340.3) - c.2943G>C (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205498 | 996 | I>F | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.11) Somatic: No Accession: 3:g.16012776T>A Codon: ATT/TTT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16012776T>A Locations: - p.Ile996Phe (EnsemblPlants:AT3G44340.1) - c.2986A>T (EnsemblPlants:AT3G44340.1) - p.Ile996Phe (EnsemblPlants:AT3G44340.4) - c.2986A>T (EnsemblPlants:AT3G44340.4) - p.Ile996Phe (EnsemblPlants:AT3G44340.3) - c.2986A>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16012728_G_T | 1012 | R>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (1) Somatic: No Accession: 3:g.16012728G>T Codon: CGC/AGC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16012728G>T Locations: - p.Arg1012Ser (EnsemblPlants:AT3G44340.1) - c.3034C>A (EnsemblPlants:AT3G44340.1) - p.Arg1012Ser (EnsemblPlants:AT3G44340.4) - c.3034C>A (EnsemblPlants:AT3G44340.4) - p.Arg1012Ser (EnsemblPlants:AT3G44340.3) - c.3034C>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16012722_C_T | 1014 | A>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.05) Somatic: No Accession: 3:g.16012722C>T Codon: GCT/ACT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16012722C>T Locations: - p.Ala1014Thr (EnsemblPlants:AT3G44340.1) - c.3040G>A (EnsemblPlants:AT3G44340.1) - p.Ala1014Thr (EnsemblPlants:AT3G44340.4) - c.3040G>A (EnsemblPlants:AT3G44340.4) - p.Ala1014Thr (EnsemblPlants:AT3G44340.3) - c.3040G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH02407178 | 1015 | A>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.15) Somatic: No Accession: 3:g.16012719C>T Codon: GCT/ACT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16012719C>T Locations: - p.Ala1015Thr (EnsemblPlants:AT3G44340.1) - c.3043G>A (EnsemblPlants:AT3G44340.1) - p.Ala1015Thr (EnsemblPlants:AT3G44340.4) - c.3043G>A (EnsemblPlants:AT3G44340.4) - p.Ala1015Thr (EnsemblPlants:AT3G44340.3) - c.3043G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205486 | 1022 | V>G | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16012328A>C Codon: GTG/GGG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16012328A>C Locations: - p.Val1022Gly (EnsemblPlants:AT3G44340.1) - c.3065T>G (EnsemblPlants:AT3G44340.1) - p.Val1022Gly (EnsemblPlants:AT3G44340.4) - c.3065T>G (EnsemblPlants:AT3G44340.4) - p.Val1022Gly (EnsemblPlants:AT3G44340.3) - c.3065T>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH00396568 | 1036 | D>G | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.06) Somatic: No Accession: 3:g.16012286T>C Codon: GAC/GGC Consequence type: missense Cytogenetic band: Genomic location: 3:g.16012286T>C Locations: - p.Asp1036Gly (EnsemblPlants:AT3G44340.1) - c.3107A>G (EnsemblPlants:AT3G44340.1) - p.Asp1036Gly (EnsemblPlants:AT3G44340.4) - c.3107A>G (EnsemblPlants:AT3G44340.4) - p.Asp1036Gly (EnsemblPlants:AT3G44340.3) - c.3107A>G (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH12396305 | 1057 | G>E | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.14) Somatic: No Accession: 3:g.16012124C>T Codon: GGA/GAA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16012124C>T Locations: - p.Gly1057Glu (EnsemblPlants:AT3G44340.1) - c.3170G>A (EnsemblPlants:AT3G44340.1) - p.Gly1057Glu (EnsemblPlants:AT3G44340.4) - c.3170G>A (EnsemblPlants:AT3G44340.4) - p.Gly1057Glu (EnsemblPlants:AT3G44340.3) - c.3170G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
tmp_3_16012122_C_T | 1058 | D>N | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 3:g.16012122C>T Codon: GAT/AAT Consequence type: missense Cytogenetic band: Genomic location: 3:g.16012122C>T Locations: - p.Asp1058Asn (EnsemblPlants:AT3G44340.1) - c.3172G>A (EnsemblPlants:AT3G44340.1) - p.Asp1058Asn (EnsemblPlants:AT3G44340.4) - c.3172G>A (EnsemblPlants:AT3G44340.4) - p.Asp1058Asn (EnsemblPlants:AT3G44340.3) - c.3172G>A (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205480 | 1059 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.13) Somatic: No Accession: 3:g.16012119G>A Codon: CCA/TCA Consequence type: missense Cytogenetic band: Genomic location: 3:g.16012119G>A Locations: - p.Pro1059Ser (EnsemblPlants:AT3G44340.1) - c.3175C>T (EnsemblPlants:AT3G44340.1) - p.Pro1059Ser (EnsemblPlants:AT3G44340.4) - c.3175C>T (EnsemblPlants:AT3G44340.4) - p.Pro1059Ser (EnsemblPlants:AT3G44340.3) - c.3175C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: | |||||||
ENSVATH06205478 | 1075 | S>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.13) Somatic: No Accession: 3:g.16011990G>A Codon: TCG/TTG Consequence type: missense Cytogenetic band: Genomic location: 3:g.16011990G>A Locations: - p.Ser1075Leu (EnsemblPlants:AT3G44340.1) - c.3224C>T (EnsemblPlants:AT3G44340.1) - p.Ser1075Leu (EnsemblPlants:AT3G44340.4) - c.3224C>T (EnsemblPlants:AT3G44340.4) - p.Ser1075Leu (EnsemblPlants:AT3G44340.3) - c.3224C>T (EnsemblPlants:AT3G44340.3) Source type: large scale study Cross-references: |