Q9M0C7 · Q9M0C7_ARATH

Function

function

Plays a role in pre-mRNA splicing as a core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentpICln-Sm protein complex
Cellular Componentprecatalytic spliceosome
Cellular ComponentU1 snRNP
Cellular ComponentU2 snRNP
Cellular ComponentU4 snRNP
Cellular ComponentU4/U6 x U5 tri-snRNP complex
Cellular ComponentU5 snRNP
Molecular FunctionRNA binding
Biological Processspliceosomal snRNP assembly

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Small nuclear ribonucleoprotein E
  • Short names
    snRNP-E
  • Alternative names
    • Sm protein E

Gene names

    • Ordered locus names
      At4g30330

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q9M0C7

Subcellular Location

Keywords

Expression

Gene expression databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain16-86Sm

Sequence similarities

Belongs to the snRNP Sm proteins family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    86
  • Mass (Da)
    10,097
  • Last updated
    2000-10-01 v1
  • Checksum
    E5AD9FDF35C3AC0D
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSIKKKTRKPLGRILLKGDNITLMMNA

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AL161576
EMBL· GenBank· DDBJ
CAB81026.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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