Q9LYF6 · AGP15_ARATH
- ProteinArabinogalactan protein 15
- GeneAGP15
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids
- Protein existenceEvidence at protein level
- Annotation score4/5
Function
function
Proteoglycan that seems to be implicated in diverse developmental roles such as differentiation, cell-cell recognition, embryogenesis and programmed cell death.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | plasma membrane | |
Cellular Component | side of membrane |
Names & Taxonomy
Protein names
- Recommended nameArabinogalactan protein 15
- Short namesAtAGP15
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9LYF6
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
PTM/Processing
Features
Showing features for signal, modified residue, peptide, glycosylation, lipidation, propeptide.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Signal | 1-22 | ||||
Modified residue | 23 | Pyrrolidone carboxylic acid | |||
Peptide | PRO_0000269017 | 23-35 | Arabinogalactan protein 15 | ||
Modified residue | 27 | 4-hydroxyproline | |||
Glycosylation | 27 | O-linked (Ara...) hydroxyproline | |||
Modified residue | 29 | 4-hydroxyproline | |||
Glycosylation | 29 | O-linked (Ara...) hydroxyproline | |||
Modified residue | 31 | 4-hydroxyproline | |||
Glycosylation | 31 | O-linked (Ara...) hydroxyproline | |||
Lipidation | 35 | GPI-anchor amidated serine | |||
Propeptide | PRO_0000269018 | 36-61 | Removed in mature form | ||
Post-translational modification
Contains 4-hydroxyproline; hydroxylated on Pro-27, Pro-29 and Pro-31.
O-glycosylated on hydroxyprolines; noncontiguous hydroxylproline residues are glycosylated with arabinogalactan.
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Tissue specificity
Expressed in reproductive tissues. Expressed in chalaza, funiculus, stigma, septum, style, integument and transmitting tract.
Gene expression databases
Structure
Family & Domains
Sequence similarities
Belongs to the AG-peptide AGP family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
- Length61
- Mass (Da)5,849
- Last updated2000-10-01 v1
- MD5 ChecksumB2353E41ADA6BAED4EA4DDC544CBECDD
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AF195896 EMBL· GenBank· DDBJ | AAG24283.1 EMBL· GenBank· DDBJ | mRNA | ||
AL163814 EMBL· GenBank· DDBJ | CAB87692.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002688 EMBL· GenBank· DDBJ | AED91716.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AF375418 EMBL· GenBank· DDBJ | AAK53002.1 EMBL· GenBank· DDBJ | mRNA | ||
AY129482 EMBL· GenBank· DDBJ | AAM91068.1 EMBL· GenBank· DDBJ | mRNA |