Structural analysis of Arabidopsis thaliana chromosome 5. XI.Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H., Tabata S.Cited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]Straincv. ColumbiaCategorySequencesSourceUniProtKB reviewed (Swiss-Prot)Submission Submitted to EMBL/GenBank/DDBJ databases (APR-2011)Cited in3
Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S., Town C.D.View abstractCited forGENOME REANNOTATIONStraincv. ColumbiaCategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant J. 89:789-804 (2017)Cited in99+99+
Empirical analysis of transcriptional activity in the Arabidopsis genome.Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J.[...], Ecker J.R.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]Straincv. ColumbiaCategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 302:842-846 (2003)Cited in99+Mapped to2
FQR1, a novel primary auxin-response gene, encodes a flavin mononucleotide-binding quinone reductase.Laskowski M.J., Dreher K.A., Gehring M.A., Abel S., Gensler A.L., Sussex I.M.View abstractCited forFUNCTION, CATALYTIC ACTIVITY, COFACTOR, INDUCTION BY AUXINCategoriesFunction, ExpressionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant Physiol. 128:578-590 (2002)Cited in1Mapped to1
Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome.Marmagne A., Rouet M.-A., Ferro M., Rolland N., Alcon C., Joyard J., Garin J., Barbier-Brygoo H., Ephritikhine G.View abstractCited forIDENTIFICATION BY MASS SPECTROMETRY, SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS]CategoriesSequences, Subcellular LocationSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCMol. Cell. Proteomics 3:675-691 (2004)Cited in42Mapped to99+
A dual role for plant quinone reductases in host-fungus interaction.Heyno E., Alkan N., Fluhr R.View abstractCited forDISRUPTION PHENOTYPECategoryPhenotypes & VariantsSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPhysiol. Plantarum 149:340-353 (2013)Cited in1Mapped to5
1,4-benzoquinone reductase from Phanerochaete chrysosporium: cDNA cloning and regulation of expression.Akileswaran L., Brock B.J., Cereghino J.L., Gold M.H.View abstractCategorySequencesSourceTAIR: AT5G54500PubMedEurope PMCAppl Environ Microbiol 65:415-421 (1999)Cited in1Mapped to6
Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling.Aryal U.K., McBride Z., Chen D., Xie J., Szymanski D.B.View abstractSourceTAIR: AT5G54500PubMedEurope PMCJ Proteomics 166:8-18 (2017)Mapped to99+
Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism.Ito J., Batth T.S., Petzold C.J., Redding-Johanson A.M., Mukhopadhyay A., Verboom R., Meyer E.H., Millar A.H., Heazlewood J.L.View abstractCategorySubcellular LocationSourceTAIR: AT5G54500PubMedEurope PMCJ Proteome Res 10:1571-1582 (2011)Mapped to99+
Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression.Hajduch M., Hearne L.B., Miernyk J.A., Casteel J.E., Joshi T., Agrawal G.K., Song Z., Zhou M., Xu D., Thelen J.J.View abstractCategoryExpressionSourceTAIR: AT5G54500PubMedEurope PMCPlant Physiol. 152:2078-2087 (2010)Cited in1Mapped to99+
Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.Ascencio-Ibanez J.T., Sozzani R., Lee T.J., Chu T.M., Wolfinger R.D., Cella R., Hanley-Bowdoin L.View abstractCategoriesFunction, ExpressionSourceTAIR: AT5G54500PubMedEurope PMCPlant Physiol 148:436-454 (2008)Mapped to99+
Alternative and effective proteomic analysis in Arabidopsis.Espagne C., Martinez A., Valot B., Meinnel T., Giglione C.View abstractCategoryFunctionSourceTAIR: AT5G54500PubMedEurope PMCProteomics 7:3788-3799 (2007)Mapped to99+
A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome.Marmagne A., Ferro M., Meinnel T., Bruley C., Kuhn L., Garin J., Barbier-Brygoo H., Ephritikhine G.View abstractCategorySubcellular LocationSourceTAIR: AT5G54500PubMedEurope PMCMol. Cell. Proteomics 6:1980-1996 (2007)Cited in27Mapped to99+
Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques.Mitra S.K., Gantt J.A., Ruby J.F., Clouse S.D., Goshe M.B.View abstractCategorySubcellular LocationSourceTAIR: AT5G54500PubMedEurope PMCJ Proteome Res 6:1933-1950 (2007)Mapped to99+
Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis.Benschop J.J., Mohammed S., O'Flaherty M., Heck A.J., Slijper M., Menke F.L.View abstractCategoryPTM / ProcessingSourceTAIR: AT5G54500PubMedEurope PMCMol Cell Proteomics 6:1198-1214 (2007)Mapped to99+
A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture.Jaquinod M., Villiers F., Kieffer-Jaquinod S., Hugouvieux V., Bruley C., Garin J., Bourguignon J.View abstractCategorySubcellular LocationSourceTAIR: AT5G54500PubMedEurope PMCMol. Cell. Proteomics 6:394-412 (2007)Cited in30Mapped to99+
Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses.Nemhauser J.L., Hong F., Chory J.View abstractCategoriesNames, ExpressionSourceTAIR: AT5G54500PubMedEurope PMCCell 126:467-475 (2006)Cited in3Mapped to99+
A quantitative analysis of Arabidopsis plasma membrane using trypsin- catalyzed (18)O labeling.Nelson C.J., Hegeman A.D., Harms A.C., Sussman M.R.View abstractSourceTAIR: AT5G54500PubMedEurope PMCMol Cell Proteomics 5:1382-1395 (2006)Mapped to99+
Expression profiling of auxin-treated Arabidopsis roots: toward a molecular analysis of lateral root emergence.Laskowski M., Biller S., Stanley K., Kajstura T., Prusty R.View abstractCategoryExpressionSourceTAIR: AT5G54500PubMedEurope PMCPlant Cell Physiol. 47:788-792 (2006)Cited in1Mapped to99
Proteomic analysis of differentially expressed proteins in fungal elicitor-treated Arabidopsis cell cultures.Chivasa S., Hamilton J.M., Pringle R.S., Ndimba B.K., Simon W.J., Lindsey K., Slabas A.R.View abstractCategoryExpressionSourceTAIR: AT5G54500PubMedEurope PMCJ Exp Bot 57:1553-1562 (2006)Mapped to28
Identification of Arabidopsis salt and osmotic stress responsive proteins using two-dimensional difference gel electrophoresis and mass spectrometry.Ndimba B.K., Chivasa S., Simon W.J., Slabas A.R.View abstractCategorySubcellular LocationSourceTAIR: AT5G54500PubMedEurope PMCProteomics 5:4185-4196 (2005)Mapped to86
Extracellular ATP functions as an endogenous external metabolite regulating plant cell viability.Chivasa S., Ndimba B.K., Simon W.J., Lindsey K., Slabas A.R.View abstractCategoryFunctionSourceTAIR: AT5G54500PubMedEurope PMCPlant Cell 17:3019-3034 (2005)Cited in1Mapped to37
Detoxification and transcriptome response in Arabidopsis seedlings exposed to the allelochemical benzoxazolin-2(3H)-one.Baerson S.R., Sanchez-Moreiras A., Pedrol-Bonjoch N., Schulz M., Kagan I.A., Agarwal A.K., Reigosa M.J., Duke S.O.View abstractCategoriesFunction, ExpressionSourceTAIR: AT5G54500PubMedEurope PMCJ Biol Chem 280:21867-21881 (2005)Mapped to99+
Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts.Borner G.H., Sherrier D.J., Weimar T., Michaelson L.V., Hawkins N.D., Macaskill A., Napier J.A., Beale M.H., Lilley K.S., Dupree P.View abstractCategorySubcellular LocationSourceTAIR: AT5G54500PubMedEurope PMCPlant Physiol. 137:104-116 (2005)Cited in1Mapped to79
Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography.Szponarski W., Sommerer N., Boyer J.C., Rossignol M., Gibrat R.View abstractCategorySubcellular LocationSourceTAIR: AT5G54500PubMedEurope PMCProteomics 4:397-406 (2004)Mapped to90