Q9LSK8 · PP240_ARATH
- ProteinPentatricopeptide repeat-containing protein At3g18020
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids688 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score1/5
Function
Names & Taxonomy
Protein names
- Recommended namePentatricopeptide repeat-containing protein At3g18020
Gene names
Organism names
- Strain
- Taxonomic lineagecellular organisms > Eukaryota (eucaryotes) > Viridiplantae > Streptophyta > Streptophytina > Embryophyta > Tracheophyta > Euphyllophyta > Spermatophyta > Magnoliopsida (flowering plants) > Mesangiospermae > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae (mustard family) > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9LSK8
Proteomes
Organism-specific databases
Genome annotation databases
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000356099 | 1-688 | Pentatricopeptide repeat-containing protein At3g18020 | |||
Sequence: MFFVTRLRLRARENGFFFSKSLSFSSASVLKSDDVEGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLHDSMDLTVERELISNPATSG |
Proteomic databases
PTM databases
Expression
Gene expression databases
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for repeat.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Repeat | 53-88 | PPR 1 | ||||
Sequence: DRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRP | ||||||
Repeat | 89-123 | PPR 2 | ||||
Sequence: DSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIP | ||||||
Repeat | 124-158 | PPR 3 | ||||
Sequence: DERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEF | ||||||
Repeat | 161-195 | PPR 4 | ||||
Sequence: SLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLP | ||||||
Repeat | 196-230 | PPR 5 | ||||
Sequence: DVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRP | ||||||
Repeat | 231-261 | PPR 6 | ||||
Sequence: NSLTLSVLIGGFLKMRDVETGRKLMKELWEY | ||||||
Repeat | 271-305 | PPR 7 | ||||
Sequence: KAAAFANLVDSMCREGYFNDIFEIAENMSLCESVN | ||||||
Repeat | 306-340 | PPR 8 | ||||
Sequence: VEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKP | ||||||
Repeat | 341-375 | PPR 9 | ||||
Sequence: RRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFP | ||||||
Repeat | 376-406 | PPR 10 | ||||
Sequence: SEYTYKLLMESLCKELDTGKARNVLELMLRK | ||||||
Repeat | 411-445 | PPR 11 | ||||
Sequence: RTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRP | ||||||
Repeat | 446-480 | PPR 12 | ||||
Sequence: DEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCA | ||||||
Repeat | 482-517 | PPR 13 | ||||
Sequence: DAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKP | ||||||
Repeat | 518-552 | PPR 14 | ||||
Sequence: GVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTA | ||||||
Repeat | 553-583 | PPR 15 | ||||
Sequence: DSTTYAIIIDGLCVTNKVDMAKKFWDDVIWP | ||||||
Repeat | 588-622 | PPR 16 | ||||
Sequence: DAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIP | ||||||
Repeat | 623-657 | PPR 17 | ||||
Sequence: NVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAP |
Sequence similarities
Belongs to the PPR family. P subfamily.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length688
- Mass (Da)77,974
- Last updated2000-10-01 v1
- Checksum0AC884D2551E761A
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AB026641 EMBL· GenBank· DDBJ | BAB01330.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002686 EMBL· GenBank· DDBJ | AEE76035.1 EMBL· GenBank· DDBJ | Genomic DNA |