Q9LR33 · R27A2_ARATH
- ProteinLarge ribosomal subunit protein uL15y
- GeneRPL27AB
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids146 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score4/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytosolic large ribosomal subunit | |
Cellular Component | cytosolic ribosome | |
Cellular Component | nucleolus | |
Cellular Component | nucleus | |
Cellular Component | plasmodesma | |
Molecular Function | mRNA binding | |
Molecular Function | structural constituent of ribosome | |
Biological Process | flower development | |
Biological Process | inflorescence development | |
Biological Process | post-embryonic development | |
Biological Process | translation |
Keywords
- Molecular function
Names & Taxonomy
Protein names
- Recommended nameLarge ribosomal subunit protein uL15y
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9LR33
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000104897 | 1-146 | Large ribosomal subunit protein uL15y | |||
Sequence: MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEAGGAVVLTA |
Proteomic databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for compositional bias, region.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-35 | Basic residues | ||||
Sequence: MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNA | ||||||
Region | 1-38 | Disordered | ||||
Sequence: MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGM |
Sequence similarities
Belongs to the universal ribosomal protein uL15 family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length146
- Mass (Da)16,292
- Last updated2000-10-01 v1
- Checksum0CA6C019D8B1A565
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
Q9LR23 | Q9LR23_ARATH | At1g23350 | 159 |
Features
Showing features for compositional bias, sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-35 | Basic residues | ||||
Sequence: MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNA | ||||||
Sequence conflict | 3-4 | in Ref. 4; CAA81190 | ||||
Sequence: TA → DG | ||||||
Sequence conflict | 31 | in Ref. 4; CAA81190 | ||||
Sequence: G → V | ||||||
Sequence conflict | 139 | in Ref. 4 | ||||
Sequence: G → C |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AC005292 EMBL· GenBank· DDBJ | AAF86998.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002684 EMBL· GenBank· DDBJ | AEE30368.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AF324716 EMBL· GenBank· DDBJ | AAG40067.1 EMBL· GenBank· DDBJ | mRNA | ||
AF349525 EMBL· GenBank· DDBJ | AAK15572.1 EMBL· GenBank· DDBJ | mRNA | ||
AF410280 EMBL· GenBank· DDBJ | AAK95266.1 EMBL· GenBank· DDBJ | mRNA | ||
BT000542 EMBL· GenBank· DDBJ | AAN18111.1 EMBL· GenBank· DDBJ | mRNA | ||
Z26208 EMBL· GenBank· DDBJ | CAA81190.1 EMBL· GenBank· DDBJ | mRNA |