Q9LL08 · Q9LL08_9ORYZ

  • Protein
    Gypsy retrotransposon integrase-like protein 1
  • Gene
    int
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Predicted
  • Annotation score
    1/5

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Molecular Functionnucleic acid binding
Biological ProcessDNA integration

Names & Taxonomy

Protein names

  • Recommended name
    Gypsy retrotransposon integrase-like protein 1

Gene names

    • Name
      int

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • ICD29
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza

Accessions

  • Primary accession
    Q9LL08

Structure

Select color scale


Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Source Identifier Method Resolution Chain Positions Links
AlphaFold AF-Q9LL08-F1 Predicted 1-116 AlphaFold · Foldseek

3D structure databases

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain24-116Integrase catalytic

Family and domain databases

Sequence

  • Sequence status
    Fragment
  • Length
    116
  • Mass (Da)
    13,079
  • Last updated
    2000-10-01 v1
  • Checksum
    5D89031ED0BD4582
KGCRECQQFGAIQRAPASAIHPIIKPWPFRGWGIDMIGQINPLSSKGHKYILVATDYFTKWVEAIPFKKVDSKDAIQFVKEHIIYRFGLPQTLTTDQGSIFVSDEFVEFVGIPGIP

Features

Showing features for non-terminal residue.

TypeIDPosition(s)Description
Non-terminal residue1
Non-terminal residue116

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AF244781
EMBL· GenBank· DDBJ
AAF74616.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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