Q9LJI5 · VA0D1_ARATH

Function

function

Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytosol
Cellular ComponentGolgi apparatus
Cellular Componentplant-type vacuole
Cellular Componentplasma membrane
Cellular Componentplasmodesma
Cellular Componentproton-transporting V-type ATPase, V0 domain
Cellular Componentvacuolar membrane
Cellular Componentvacuole
Molecular Functionproton-transporting ATPase activity, rotational mechanism

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    V-type proton ATPase subunit d1
  • Short names
    V-ATPase subunit d1
  • Alternative names
    • Vacuolar H(+)-ATPase subunit d isoform 1
    • Vacuolar proton pump subunit d1

Gene names

    • Name
      VHA-d1
    • ORF names
      MZN14.21
    • Ordered locus names
      At3g28710

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q9LJI5

Proteomes

Organism-specific databases

Genome annotation databases

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00001193561-351V-type proton ATPase subunit d1

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Subunit

V-ATPase is a heteromultimeric enzyme composed of a peripheral catalytic V1 complex (components A to H) attached to an integral membrane V0 proton pore complex (components: a, c, c'', d and e).

Binary interactions

TypeEntry 1Entry 2Number of experimentsIntAct
BINARY Q9LJI5TIFY8 Q84MB23EBI-25520180, EBI-4426557
BINARY Q9LJI5WER Q9SEI03EBI-25520180, EBI-533373

Protein-protein interaction databases

Structure

Family & Domains

Sequence similarities

Belongs to the V-ATPase V0D/AC39 subunit family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    351
  • Mass (Da)
    40,792
  • Last updated
    2000-10-01 v1
  • Checksum
    5E1A67A149AC4EF4
MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGSYLQNEPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHERDVQELIEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECLTSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTREDRKKLYSNFGLLYPYGHEELAICEDIDQVRGVMEKYPPYQAIFSKMSYGESQMLDKAFYEEEVRRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRIHDSVVYMF

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AP000420
EMBL· GenBank· DDBJ
BAB02186.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002686
EMBL· GenBank· DDBJ
AEE77480.1
EMBL· GenBank· DDBJ
Genomic DNA
AY039864
EMBL· GenBank· DDBJ
AAK63968.1
EMBL· GenBank· DDBJ
mRNA
AY077656
EMBL· GenBank· DDBJ
AAL76134.1
EMBL· GenBank· DDBJ
mRNA
AY142622
EMBL· GenBank· DDBJ
AAN13080.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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