Q9LG05 · WRK10_ARATH
- ProteinProbable WRKY transcription factor 10
- GeneWRKY10
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids485 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).
Modulates seed size by negatively regulating the cellularization of syncytial endosperm (PubMed:16293693).
Modulates seed size by negatively regulating the cellularization of syncytial endosperm (PubMed:16293693).
Features
Showing features for dna binding, binding site.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
DNA binding | 301-366 | WRKY | ||||
Sequence: SDEDNPNDGYRWRKYGQKVVKGNPNPRSYFKCTNIECRVKKHVERGADNIKLVVTTYDGIHNHPSP | ||||||
Binding site | 332 | Zn2+ (UniProtKB | ChEBI) | ||||
Sequence: C | ||||||
Binding site | 337 | Zn2+ (UniProtKB | ChEBI) | ||||
Sequence: C | ||||||
Binding site | 361 | Zn2+ (UniProtKB | ChEBI) | ||||
Sequence: H | ||||||
Binding site | 363 | Zn2+ (UniProtKB | ChEBI) | ||||
Sequence: H |
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA-binding transcription factor activity | |
Molecular Function | metal ion binding | |
Molecular Function | sequence-specific DNA binding | |
Biological Process | endosperm development |
Keywords
- Molecular function
- Biological process
- Ligand
Names & Taxonomy
Protein names
- Recommended nameProbable WRKY transcription factor 10
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9LG05
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
Phenotypes & Variants
Features
Showing features for mutagenesis.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Mutagenesis | 344 | In mini3-1; reduced seed size and earlier endosperm cellularization. | ||||
Sequence: E → K |
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 60 variants from UniProt as well as other sources including ClinVar and dbSNP.
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000133652 | 1-485 | Probable WRKY transcription factor 10 | |||
Sequence: MSDFDENFIEMTSYWAPPSSPSPRTILAMLEQTDNGLNPISEIFPQESLPRDHTDQSGQRSGLRERLAARVGFNLPTLNTEENMSPLDAFFRSSNVPNSPVVAISPGFSPSALLHTPNMVSDSSQIIPPSSATNYGPLEMVETSGEDNAAMMMFNNDLPYQPYNVDLPSLEVFDDIATEESFYIPSYEPHVDPIGTPLVTSFESELVDDAHTDIISIEDSESEDGNKDDDDEDFQYEDEDEDQYDQDQDVDEDEEEEKDEDNVALDDPQPPPPKRRRYEVSNMIGATRTSKTQRIILQMESDEDNPNDGYRWRKYGQKVVKGNPNPRSYFKCTNIECRVKKHVERGADNIKLVVTTYDGIHNHPSPPARRSNSSSRNRSAGATIPQNQNDRTSRLGRAPPTPTPPTPPPSSYTPEEMRPFSSLATEIDLTEVYMTGISMLPNIPVYENSGFMYQNDEPTMNAMPDGSDVYDGIMERLYFKFGVDM |
Proteomic databases
Expression
Tissue specificity
Expressed in male gametophytes (pollen) and in the endosperm of fertilized ovules.
Developmental stage
Expressed in the endosperm of embryo from the two nuclei stage to the late globular embryo stage, including the endosperm cellularization time.
Gene expression databases
Structure
Family & Domains
Features
Showing features for region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 43-62 | Disordered | ||||
Sequence: IFPQESLPRDHTDQSGQRSG | ||||||
Region | 215-293 | Disordered | ||||
Sequence: ISIEDSESEDGNKDDDDEDFQYEDEDEDQYDQDQDVDEDEEEEKDEDNVALDDPQPPPPKRRRYEVSNMIGATRTSKTQ | ||||||
Compositional bias | 222-263 | Acidic residues | ||||
Sequence: SEDGNKDDDDEDFQYEDEDEDQYDQDQDVDEDEEEEKDEDNV | ||||||
Region | 358-417 | Disordered | ||||
Sequence: DGIHNHPSPPARRSNSSSRNRSAGATIPQNQNDRTSRLGRAPPTPTPPTPPPSSYTPEEM | ||||||
Compositional bias | 366-396 | Polar residues | ||||
Sequence: PPARRSNSSSRNRSAGATIPQNQNDRTSRLG | ||||||
Compositional bias | 398-414 | Pro residues | ||||
Sequence: APPTPTPPTPPPSSYTP |
Sequence similarities
Belongs to the WRKY group I family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length485
- Mass (Da)54,552
- Last updated2007-06-12 v2
- Checksum3D96CE29CC9BFAC0
Sequence caution
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 222-263 | Acidic residues | ||||
Sequence: SEDGNKDDDDEDFQYEDEDEDQYDQDQDVDEDEEEEKDEDNV | ||||||
Compositional bias | 366-396 | Polar residues | ||||
Sequence: PPARRSNSSSRNRSAGATIPQNQNDRTSRLG | ||||||
Compositional bias | 398-414 | Pro residues | ||||
Sequence: APPTPTPPTPPPSSYTP |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AY071851 EMBL· GenBank· DDBJ | AAL61861.1 EMBL· GenBank· DDBJ | mRNA | ||
AC002328 EMBL· GenBank· DDBJ | AAF79511.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
CP002684 EMBL· GenBank· DDBJ | AEE33270.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
DQ446362 EMBL· GenBank· DDBJ | ABE65713.1 EMBL· GenBank· DDBJ | mRNA |