Q9LFM6 · PP375_ARATH
- ProteinPentatricopeptide repeat-containing protein At5g11310, mitochondrial
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids602 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score3/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytosol | |
Cellular Component | mitochondrion | |
Cellular Component | nucleus | |
Biological Process | negative regulation of abscisic acid-activated signaling pathway | |
Biological Process | regulation of seed germination | |
Biological Process | seed germination |
Names & Taxonomy
Protein names
- Recommended namePentatricopeptide repeat-containing protein At5g11310, mitochondrial
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9LFM6
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
PTM/Processing
Features
Showing features for transit peptide, chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Transit peptide | 1-35 | Mitochondrion | ||||
Sequence: MNSLFTAFRRNLLLNPNPHRNFFLHRLLSSSRRSS | ||||||
Chain | PRO_0000363512 | 36-602 | Pentatricopeptide repeat-containing protein At5g11310, mitochondrial | |||
Sequence: PLIPVEPLIQRIQSPAVPDSTCTPPQQNTVSKTDLSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNTYREAVDAPPDKDRRKSILHRAEAMSDVLKGCRNPRKLVKMRGSHKKAVGEDINLIDDINERNGDAGDFE |
Proteomic databases
Expression
Gene expression databases
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for repeat.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Repeat | 134-165 | PPR 1 | ||||
Sequence: SPSLFDSVVNSLCKAREFEIAWSLVFDRVRSD | ||||||
Repeat | 172-202 | PPR 2 | ||||
Sequence: SADTFIVLIRRYARAGMVQQAIRAFEFARSY | ||||||
Repeat | 211-241 | PPR 3 | ||||
Sequence: ELRLLEVLLDALCKEGHVREASMYLERIGGT | ||||||
Repeat | 249-283 | PPR 4 | ||||
Sequence: SVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKP | ||||||
Repeat | 284-318 | PPR 5 | ||||
Sequence: TVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEI | ||||||
Repeat | 319-353 | PPR 6 | ||||
Sequence: NFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGP | ||||||
Repeat | 354-388 | PPR 7 | ||||
Sequence: TIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDP | ||||||
Repeat | 389-423 | PPR 8 | ||||
Sequence: TTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP | ||||||
Repeat | 424-458 | PPR 9 | ||||
Sequence: DRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDP | ||||||
Repeat | 459-493 | PPR 10 | ||||
Sequence: DLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIP | ||||||
Repeat | 494-528 | PPR 11 | ||||
Sequence: QYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSK |
Sequence similarities
Belongs to the PPR family. P subfamily.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
- Length602
- Mass (Da)68,337
- Last updated2000-10-01 v1
- Checksum18488CB0319F5178
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AL360314 EMBL· GenBank· DDBJ | CAB96666.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002688 EMBL· GenBank· DDBJ | AED91658.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AK229100 EMBL· GenBank· DDBJ | BAF00978.1 EMBL· GenBank· DDBJ | mRNA |