Q9LFB6 · Q9LFB6_ARATH
- ProteinDuplicated homeodomain-like superfamily protein
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids267 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score1/5
Variants
Variant ID(s) | Position(s) | Change | Description | Clinical significance | Provenance | ||
---|---|---|---|---|---|---|---|
ENSVATH10471895 | 9 | G>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.03) Somatic: No Accession: 5:g.77140G>A Codon: GGA/AGA Consequence type: missense Cytogenetic band: Genomic location: 5:g.77140G>A Locations: - p.Gly9Arg (EnsemblPlants:AT5G01200.1) - c.25G>A (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
tmp_5_77151_G_A | 12 | M>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (1) Somatic: No Accession: 5:g.77151G>A Codon: ATG/ATA Consequence type: missense Cytogenetic band: Genomic location: 5:g.77151G>A Locations: - p.Met12Ile (EnsemblPlants:AT5G01200.1) - c.36G>A (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
tmp_5_77192_G_A | 26 | R>K | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (1) Somatic: No Accession: 5:g.77192G>A Codon: AGA/AAA Consequence type: missense Cytogenetic band: Genomic location: 5:g.77192G>A Locations: - p.Arg26Lys (EnsemblPlants:AT5G01200.1) - c.77G>A (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
ENSVATH03001033 | 94 | G>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.66) Somatic: No Accession: 5:g.77395G>A Codon: GGC/AGC Consequence type: missense Cytogenetic band: Genomic location: 5:g.77395G>A Locations: - p.Gly94Ser (EnsemblPlants:AT5G01200.1) - c.280G>A (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
tmp_5_77402_A_T | 96 | D>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.09) Somatic: No Accession: 5:g.77402A>T Codon: GAC/GTC Consequence type: missense Cytogenetic band: Genomic location: 5:g.77402A>T Locations: - p.Asp96Val (EnsemblPlants:AT5G01200.1) - c.287A>T (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
tmp_5_77414_C_T | 100 | A>V | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.52) Somatic: No Accession: 5:g.77414C>T Codon: GCT/GTT Consequence type: missense Cytogenetic band: Genomic location: 5:g.77414C>T Locations: - p.Ala100Val (EnsemblPlants:AT5G01200.1) - c.299C>T (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
tmp_5_77446_A_G | 111 | N>D | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.35) Somatic: No Accession: 5:g.77446A>G Codon: AAC/GAC Consequence type: missense Cytogenetic band: Genomic location: 5:g.77446A>G Locations: - p.Asn111Asp (EnsemblPlants:AT5G01200.1) - c.331A>G (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
tmp_5_77455_T_A | 114 | Y>N | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.29) Somatic: No Accession: 5:g.77455T>A Codon: TAC/AAC Consequence type: missense Cytogenetic band: Genomic location: 5:g.77455T>A Locations: - p.Tyr114Asn (EnsemblPlants:AT5G01200.1) - c.340T>A (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
tmp_5_77470_G_A | 119 | V>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.43) Somatic: No Accession: 5:g.77470G>A Codon: GTC/ATC Consequence type: missense Cytogenetic band: Genomic location: 5:g.77470G>A Locations: - p.Val119Ile (EnsemblPlants:AT5G01200.1) - c.355G>A (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
tmp_5_77527_C_T | 138 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.18) Somatic: No Accession: 5:g.77527C>T Codon: CCG/TCG Consequence type: missense Cytogenetic band: Genomic location: 5:g.77527C>T Locations: - p.Pro138Ser (EnsemblPlants:AT5G01200.1) - c.412C>T (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
ENSVATH03001042 | 228 | D>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.77) Somatic: No Accession: 5:g.78173A>C Codon: GAC/GCC Consequence type: missense Cytogenetic band: Genomic location: 5:g.78173A>C Locations: - p.Asp228Ala (EnsemblPlants:AT5G01200.1) - c.683A>C (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
tmp_5_78205_T_C | 239 | F>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.55) Somatic: No Accession: 5:g.78205T>C Codon: TTT/CTT Consequence type: missense Cytogenetic band: Genomic location: 5:g.78205T>C Locations: - p.Phe239Leu (EnsemblPlants:AT5G01200.1) - c.715T>C (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
ENSVATH10471946 | 245 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.28) Somatic: No Accession: 5:g.78223C>T Codon: CCA/TCA Consequence type: missense Cytogenetic band: Genomic location: 5:g.78223C>T Locations: - p.Pro245Ser (EnsemblPlants:AT5G01200.1) - c.733C>T (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
ENSVATH03001043 | 253 | S>P | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.35) Somatic: No Accession: 5:g.78247T>C Codon: TCT/CCT Consequence type: missense Cytogenetic band: Genomic location: 5:g.78247T>C Locations: - p.Ser253Pro (EnsemblPlants:AT5G01200.1) - c.757T>C (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
ENSVATH06901261 | 256 | A>T | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.1) Somatic: No Accession: 5:g.78256G>A Codon: GCG/ACG Consequence type: missense Cytogenetic band: Genomic location: 5:g.78256G>A Locations: - p.Ala256Thr (EnsemblPlants:AT5G01200.1) - c.766G>A (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
ENSVATH13865164 | 257 | S>F | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.01) Somatic: No Accession: 5:g.78260C>T Codon: TCT/TTT Consequence type: missense Cytogenetic band: Genomic location: 5:g.78260C>T Locations: - p.Ser257Phe (EnsemblPlants:AT5G01200.1) - c.770C>T (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: | |||||||
ENSVATH10471947 | 265 | Q>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious - low confidence (0.02) Somatic: No Accession: 5:g.78284A>T Codon: CAG/CTG Consequence type: missense Cytogenetic band: Genomic location: 5:g.78284A>T Locations: - p.Gln265Leu (EnsemblPlants:AT5G01200.1) - c.794A>T (EnsemblPlants:AT5G01200.1) Source type: large scale study Cross-references: |