Q9I912 · Q9I912_DANRE
- ProteinCryptochrome 4
- Genecry4
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids558 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score3/5
Function
Cofactor
Note: Binds 1 FAD per subunit.
Features
Showing features for binding site, site.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Binding site | 245-249 | FAD (UniProtKB | ChEBI) | ||||
Sequence: TTGLS | ||||||
Binding site | 286-293 | FAD (UniProtKB | ChEBI) | ||||
Sequence: QVLWREFF | ||||||
Site | 317 | Electron transfer via tryptophanyl radical | ||||
Sequence: W | ||||||
Site | 371 | Electron transfer via tryptophanyl radical | ||||
Sequence: W | ||||||
Binding site | 384-386 | FAD (UniProtKB | ChEBI) | ||||
Sequence: DAD | ||||||
Site | 394 | Electron transfer via tryptophanyl radical | ||||
Sequence: W |
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | nucleus | |
Molecular Function | deoxyribodipyrimidine photo-lyase activity | |
Molecular Function | DNA binding | |
Molecular Function | FAD binding | |
Molecular Function | photoreceptor activity | |
Biological Process | circadian regulation of gene expression | |
Biological Process | entrainment of circadian clock by photoperiod |
Keywords
- Ligand
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio
Accessions
- Primary accessionQ9I912
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Structure
Family & Domains
Features
Showing features for domain, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 3-133 | Photolyase/cryptochrome alpha/beta | ||||
Sequence: HRTIHLFRKGLRLHDNPSLLGALASSSALYPVYVLDRVFLQGAMHMGALRWRFLLQSLEDLDTRLQAIGSRLFVLCGSTANILRELVAQWGITQISYDTEVEPYYTRMDKDIQTVAQENGLQTYTCVSHTL | ||||||
Region | 513-558 | Disordered | ||||
Sequence: EEEGLLEEAESQCTSKRFSGSSDHKPRPCSWTPETLQLSELSGEVM | ||||||
Compositional bias | 524-551 | Polar residues | ||||
Sequence: QCTSKRFSGSSDHKPRPCSWTPETLQLS |
Sequence similarities
Belongs to the DNA photolyase class-1 family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length558
- Mass (Da)63,837
- Last updated2000-10-01 v1
- Checksum96EAE95C24EFC79C
Computationally mapped potential isoform sequences
There are 2 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
F1R2R7 | F1R2R7_DANRE | cry4 | 579 | ||
A0A8M3AMN1 | A0A8M3AMN1_DANRE | cry4 | 558 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 524-551 | Polar residues | ||||
Sequence: QCTSKRFSGSSDHKPRPCSWTPETLQLS |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AB042253 EMBL· GenBank· DDBJ | BAA96851.1 EMBL· GenBank· DDBJ | mRNA |