Q9HBG6 · IF122_HUMAN
- ProteinIntraflagellar transport protein 122 homolog
- GeneIFT122
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids1241 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is required in ciliogenesis and ciliary protein trafficking (PubMed:27932497, PubMed:29220510).
Involved in cilia formation during neuronal patterning. Acts as a negative regulator of Shh signaling. Required to recruit TULP3 to primary cilia (By similarity).
Involved in cilia formation during neuronal patterning. Acts as a negative regulator of Shh signaling. Required to recruit TULP3 to primary cilia (By similarity).
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Keywords
- Molecular function
- Biological process
Enzyme and pathway databases
Protein family/group databases
Names & Taxonomy
Protein names
- Recommended nameIntraflagellar transport protein 122 homolog
- Alternative names
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Primates > Haplorrhini > Catarrhini > Hominidae > Homo
Accessions
- Primary accessionQ9HBG6
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Note: Localizes to photoreceptor connecting cilia.
Keywords
- Cellular component
Disease & Variants
Involvement in disease
Cranioectodermal dysplasia 1 (CED1)
- Note
- DescriptionA disorder characterized by craniofacial, skeletal and ectodermal abnormalities. Clinical features include dolichocephaly (with or without sagittal suture synostosis), scaphocephaly, short stature, limb shortening, short ribs, narrow chest, brachydactyly, renal failure and hepatic fibrosis, small and abnormally shaped teeth, sparse hair, skin laxity and abnormal nails.
- See alsoMIM:218330
Natural variants in CED1
Variant ID | Position(s) | Change | Description | |
---|---|---|---|---|
VAR_063584 | 7 | W>C | in CED1; perturbed ciliary protein trafficking; no effect on interaction with ITF43:WDR35; fail to assemble IFT-A complex at the cilia base; no effect on ciliogenesis; dbSNP:rs267607193 | |
VAR_063585 | 322 | S>F | in CED1; no effect on interaction with ITF43:WDR35; dbSNP:rs267607192 | |
VAR_081601 | 391 | V>L | in CED1; uncertain significance; dbSNP:rs777418707 | |
VAR_081602 | 495 | G>R | in CED1; strongly decreases interaction with ITF43:WDR35; dbSNP:rs397515568 | |
VAR_063586 | 502 | V>G | in CED1; strongly decreases interaction with ITF43:WDR35; dbSNP:rs267607191 | |
VAR_081603 | 570 | F>C | in CED1; uncertain significance; dbSNP:rs2078919826 | |
VAR_081604 | 572 | G>V | in CED1; decreased ciliogenesis; perturbed ciliary protein trafficking; strongly decreases interaction with ITF43:WDR35; fail to assemble IFT-A complex at the cilia base; dbSNP:rs786205566 | |
VAR_081605 | 712 | L>P | in CED1; uncertain significance; dbSNP:rs1224050823 |
Features
Showing features for natural variant.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Natural variant | VAR_063584 | 7 | in CED1; perturbed ciliary protein trafficking; no effect on interaction with ITF43:WDR35; fail to assemble IFT-A complex at the cilia base; no effect on ciliogenesis; dbSNP:rs267607193 | |||
Sequence: W → C | ||||||
Natural variant | VAR_063585 | 322 | in CED1; no effect on interaction with ITF43:WDR35; dbSNP:rs267607192 | |||
Sequence: S → F | ||||||
Natural variant | VAR_081601 | 391 | in CED1; uncertain significance; dbSNP:rs777418707 | |||
Sequence: V → L | ||||||
Natural variant | VAR_081602 | 495 | in CED1; strongly decreases interaction with ITF43:WDR35; dbSNP:rs397515568 | |||
Sequence: G → R | ||||||
Natural variant | VAR_063586 | 502 | in CED1; strongly decreases interaction with ITF43:WDR35; dbSNP:rs267607191 | |||
Sequence: V → G | ||||||
Natural variant | VAR_081603 | 570 | in CED1; uncertain significance; dbSNP:rs2078919826 | |||
Sequence: F → C | ||||||
Natural variant | VAR_081604 | 572 | in CED1; decreased ciliogenesis; perturbed ciliary protein trafficking; strongly decreases interaction with ITF43:WDR35; fail to assemble IFT-A complex at the cilia base; dbSNP:rs786205566 | |||
Sequence: G → V | ||||||
Natural variant | VAR_081605 | 712 | in CED1; uncertain significance; dbSNP:rs1224050823 | |||
Sequence: L → P |
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 1,566 variants from UniProt as well as other sources including ClinVar and dbSNP.
Keywords
- Disease
Organism-specific databases
Miscellaneous
Genetic variation databases
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000051045 | 1-1241 | Intraflagellar transport protein 122 homolog | |||
Sequence: MRAVLTWRDKAEHCINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDAIQCVSYNPITHQLASCSSSDFGLWSPEQKSVSKHKSSSKIICCSWTNDGQYLALGMFNGIISIRNKNGEEKVKIERPGGSLSPIWSICWNPSSRWESFWMNRENEDAEDVIVNRYIQEIPSTLKSAVYSSQGSEAEEEEPEEEDDSPRDDNLEERNDILAVADWGQKVSFYQLSGKQIGKDRALNFDPCCISYFTKGEYILLGGSDKQVSLFTKDGVRLGTVGEQNSWVWTCQAKPDSNYVVVGCQDGTISFYQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIYELYSEDLSDMHYRVKEKIIKKFECNLLVVCANHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVIGGPPGREGLLVGLKNGQILKIFVDNLFAIVLLKQATAVRCLDMSASRKKLAVVDENDTCLVYDIDTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASTFPVHRQKLQGFVVGYNGSKIFCLHVFSISAVEVPQSAPMYQYLDRKLFKEAYQIACLGVTDTDWRELAMEALEGLDFETAKKAFIRVQDLRYLELISSIEERKKRGETNNDLFLADVFSYQGKFHEAAKLYKRSGHENLALEMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIKEPKAAVEMYISAGEHVKAIEICGDHGWVDMLIDIARKLDKAEREPLLLCATYLKKLDSPGYAAETYLKMGDLKSLVQLHVETQRWDEAFALGEKHPEFKDDIYMPYAQWLAENDRFEEAQKAFHKAGRQREAVQVLEQLTNNAVAESRFNDAAYYYWMLSMQCLDIAQDPAQKDTMLGKFYHFQRLAELYHGYHAIHRHTEDPFSVHRPETLFNISRFLLHSLPKDTPSGISKVKILFTLAKQSKALGAYRLARHAYDKLRGLYIPARFQKSIELGTLTIRAKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFIFSASSYDVLHLVEFYLEEGITDEEAISLIDLEVLRPKRDDRQLEIANNSSQILRLVETKDSIGDEDPFTAKLSFEQGGSEFVPVVVSRLVLRSMSRRDVLIKRWPPPLRWQYFRSLLPDASITMCPSCFQMFHSEDYELLVLQHGCCPYCRRCKDDPGP |
Proteomic databases
PTM databases
Expression
Tissue specificity
Expressed in many tissues. Predominant expression in testis and pituitary.
Gene expression databases
Organism-specific databases
Interaction
Subunit
Component of the IFT complex A (IFT-A) complex (PubMed:20889716, PubMed:27932497).
IFT-A complex is divided into a core subcomplex composed of IFT122:IFT140:WDR19 which is associated with TULP3 and a peripheral subcomplex composed of IFT43:WDR35:TTC21B (PubMed:27932497, PubMed:29220510).
Interacts with IFT43:WDR35; the interaction connects the 2 IFT-A subcomplexes (PubMed:29220510).
Interacts with IFTAP; the interaction associates IFTAP with IFT-A complex (PubMed:30476139).
IFT-A complex is divided into a core subcomplex composed of IFT122:IFT140:WDR19 which is associated with TULP3 and a peripheral subcomplex composed of IFT43:WDR35:TTC21B (PubMed:27932497, PubMed:29220510).
Interacts with IFT43:WDR35; the interaction connects the 2 IFT-A subcomplexes (PubMed:29220510).
Interacts with IFTAP; the interaction associates IFTAP with IFT-A complex (PubMed:30476139).
Binary interactions
Type | Entry 1 | Entry 2 | Number of experiments | Intact | |
---|---|---|---|---|---|
XENO | Q9HBG6 | ORF Q9Q2G4 | 3 | EBI-2805994, EBI-6248094 | |
BINARY | Q9HBG6 | WDR19 Q8NEZ3 | 6 | EBI-2805994, EBI-11903679 | |
BINARY | Q9HBG6-3 | TTC21B Q7Z4L5 | 2 | EBI-26854447, EBI-2851301 |
Protein-protein interaction databases
Miscellaneous
Structure
Family & Domains
Features
Showing features for repeat, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Repeat | 10-50 | WD 1 | ||||
Sequence: KAEHCINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLK | ||||||
Repeat | 51-91 | WD 2 | ||||
Sequence: GHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYT | ||||||
Repeat | 93-129 | WD 3 | ||||
Sequence: NDAIQCVSYNPITHQLASCSSSDFGLWSPEQKSVSKH | ||||||
Repeat | 131-169 | WD 4 | ||||
Sequence: SSSKIICCSWTNDGQYLALGMFNGIISIRNKNGEEKVKI | ||||||
Region | 222-246 | Disordered | ||||
Sequence: VYSSQGSEAEEEEPEEEDDSPRDDN | ||||||
Compositional bias | 229-245 | Acidic residues | ||||
Sequence: EAEEEEPEEEDDSPRDD | ||||||
Repeat | 278-317 | WD 5 | ||||
Sequence: ALNFDPCCISYFTKGEYILLGGSDKQVSLFTKDGVRLGTV | ||||||
Repeat | 319-359 | WD 6 | ||||
Sequence: EQNSWVWTCQAKPDSNYVVVGCQDGTISFYQLIFSTVHGLY | ||||||
Repeat | 512-551 | WD 7 | ||||
Sequence: KQATAVRCLDMSASRKKLAVVDENDTCLVYDIDTKELLFQ |
Domain
Forms the trimeric core subcomplex IFT122:IFT140:WDR19 via the C-terminal region, whereas it interacts with IFT43:WDR35 via the N-terminal region containing the WD repeats.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence & Isoforms
- Sequence statusComplete
This entry describes 10 isoforms produced by Alternative splicing.
Q9HBG6-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Name1
- Length1,241
- Mass (Da)141,825
- Last updated2008-11-04 v2
- Checksum6C3C543369A6BDF5
Q9HBG6-3
- Name3
- Differences from canonical
- 188-247: SRWESFWMNRENEDAEDVIVNRYIQEIPSTLKSAVYSSQGSEAEEEEPEEEDDSPRDDNL → R
Q9HBG6-4
- Name4
Q9HBG6-5
- Name5
- Differences from canonical
- 91-91: T → TSWSVMSSLHLHLPFLGLHKTVRVTATDKAPKGQGGRIDCLRPSVQNQPGQK
Q9HBG6-6
- Name6
Q9HBG6-7
- Name7
Q9HBG6-8
- Name8
- Differences from canonical
- 1-150: Missing
Q9HBG6-9
- Name9
Q9HBG6-10
- Name10
Q9HBG6-11
- Name11
- Differences from canonical
- 188-247: SRWESFWMNRENEDAEDVIVNRYIQEIPSTLKSAVYSSQGSEAEEEEPEEEDDSPRDDNL → R
- 1053-1241: Missing
Computationally mapped potential isoform sequences
There are 59 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A8I5QJE0 | A0A8I5QJE0_HUMAN | IFT122 | 864 | ||
A0A8I5QKY6 | A0A8I5QKY6_HUMAN | IFT122 | 952 | ||
A0A8I5QKR8 | A0A8I5QKR8_HUMAN | IFT122 | 1112 | ||
A0A8I5QKV2 | A0A8I5QKV2_HUMAN | IFT122 | 1220 | ||
A0A8I5QKV6 | A0A8I5QKV6_HUMAN | IFT122 | 1129 | ||
A0A8I5QKX8 | A0A8I5QKX8_HUMAN | IFT122 | 1165 | ||
A0A8I5QL12 | A0A8I5QL12_HUMAN | IFT122 | 1010 | ||
A0A8I5QL25 | A0A8I5QL25_HUMAN | IFT122 | 1109 | ||
A0A8I5QJX4 | A0A8I5QJX4_HUMAN | IFT122 | 473 | ||
A0A8I5QKJ5 | A0A8I5QKJ5_HUMAN | IFT122 | 1127 | ||
A0A8J9A3C6 | A0A8J9A3C6_HUMAN | IFT122 | 1113 | ||
D6RIB5 | D6RIB5_HUMAN | IFT122 | 603 | ||
D6RAF7 | D6RAF7_HUMAN | IFT122 | 80 | ||
H0YAG6 | H0YAG6_HUMAN | IFT122 | 69 | ||
H0YAG9 | H0YAG9_HUMAN | IFT122 | 67 | ||
H0Y9Q2 | H0Y9Q2_HUMAN | IFT122 | 335 | ||
H0Y9I6 | H0Y9I6_HUMAN | IFT122 | 532 | ||
H0Y9Y9 | H0Y9Y9_HUMAN | IFT122 | 46 | ||
H0Y978 | H0Y978_HUMAN | IFT122 | 1076 | ||
A0A8C8L0T3 | A0A8C8L0T3_HUMAN | IFT122 | 140 | ||
A0A8I5KNX7 | A0A8I5KNX7_HUMAN | IFT122 | 880 | ||
A0A8I5KQ16 | A0A8I5KQ16_HUMAN | IFT122 | 1190 | ||
A0A8I5KQF6 | A0A8I5KQF6_HUMAN | IFT122 | 663 | ||
A0A8I5KP73 | A0A8I5KP73_HUMAN | IFT122 | 1233 | ||
A0A8I5KPB4 | A0A8I5KPB4_HUMAN | IFT122 | 977 | ||
A0A8I5KS77 | A0A8I5KS77_HUMAN | IFT122 | 1014 | ||
A0A8I5KS91 | A0A8I5KS91_HUMAN | IFT122 | 893 | ||
A0A8I5KRP5 | A0A8I5KRP5_HUMAN | IFT122 | 816 | ||
A0A8I5KSG5 | A0A8I5KSG5_HUMAN | IFT122 | 1242 | ||
A0A8I5KR03 | A0A8I5KR03_HUMAN | IFT122 | 604 | ||
A0A8I5KR07 | A0A8I5KR07_HUMAN | IFT122 | 764 | ||
A0A8I5KTT9 | A0A8I5KTT9_HUMAN | IFT122 | 621 | ||
A0A8I5KUK8 | A0A8I5KUK8_HUMAN | IFT122 | 399 | ||
A0A8I5KSN5 | A0A8I5KSN5_HUMAN | IFT122 | 1265 | ||
A0A8I5KSV0 | A0A8I5KSV0_HUMAN | IFT122 | 1163 | ||
A0A8I5KT04 | A0A8I5KT04_HUMAN | IFT122 | 1130 | ||
A0A8I5KT76 | A0A8I5KT76_HUMAN | IFT122 | 64 | ||
A0A8I5KT78 | A0A8I5KT78_HUMAN | IFT122 | 95 | ||
A0A8I5KSQ0 | A0A8I5KSQ0_HUMAN | IFT122 | 190 | ||
A0A8I5KTI2 | A0A8I5KTI2_HUMAN | IFT122 | 1018 | ||
A0A8I5KTL4 | A0A8I5KTL4_HUMAN | IFT122 | 1164 | ||
A0A8I5KX44 | A0A8I5KX44_HUMAN | IFT122 | 1128 | ||
A0A8I5KWK4 | A0A8I5KWK4_HUMAN | IFT122 | 1183 | ||
A0A8I5KX14 | A0A8I5KX14_HUMAN | IFT122 | 1145 | ||
A0A8I5KVC7 | A0A8I5KVC7_HUMAN | IFT122 | 1223 | ||
A0A8I5KUU2 | A0A8I5KUU2_HUMAN | IFT122 | 1189 | ||
A0A8I5KUV2 | A0A8I5KUV2_HUMAN | IFT122 | 567 | ||
A0A8I5KUY3 | A0A8I5KUY3_HUMAN | IFT122 | 953 | ||
A0A8I5KV39 | A0A8I5KV39_HUMAN | IFT122 | 263 | ||
A0A8I5KW25 | A0A8I5KW25_HUMAN | IFT122 | 976 | ||
A0A8I5KW32 | A0A8I5KW32_HUMAN | IFT122 | 862 | ||
A0A8I5KYB6 | A0A8I5KYB6_HUMAN | IFT122 | 1206 | ||
A0A8I5KYX1 | A0A8I5KYX1_HUMAN | IFT122 | 1133 | ||
A0A8I5KYR0 | A0A8I5KYR0_HUMAN | IFT122 | 79 | ||
A0A8I5KYT5 | A0A8I5KYT5_HUMAN | IFT122 | 1105 | ||
A0A8I5KZ03 | A0A8I5KZ03_HUMAN | IFT122 | 249 | ||
A0A8I5KXA7 | A0A8I5KXA7_HUMAN | IFT122 | 821 | ||
A0A8I5KXC8 | A0A8I5KXC8_HUMAN | IFT122 | 622 | ||
A0A8I5KXT5 | A0A8I5KXT5_HUMAN | IFT122 | 1224 |
Features
Showing features for alternative sequence, compositional bias, sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Alternative sequence | VSP_056773 | 1-150 | in isoform 7 and isoform 8 | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_043310 | 65-116 | in isoform 4 | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_056774 | 65-116 | in isoform 9 | |||
Sequence: GKRFASGSADKSVIIWTSKLEGILKYTHNDAIQCVSYNPITHQLASCSSSDF → VLCIE | ||||||
Alternative sequence | VSP_056775 | 66-117 | in isoform 10 | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_045224 | 91 | in isoform 5 and isoform 6 | |||
Sequence: T → TSWSVMSSLHLHLPFLGLHKTVRVTATDKAPKGQGGRIDCLRPSVQNQPGQK | ||||||
Alternative sequence | VSP_056776 | 139-247 | in isoform 10 | |||
Sequence: SWTNDGQYLALGMFNGIISIRNKNGEEKVKIERPGGSLSPIWSICWNPSSRWESFWMNRENEDAEDVIVNRYIQEIPSTLKSAVYSSQGSEAEEEEPEEEDDSPRDDNL → R | ||||||
Alternative sequence | VSP_041161 | 188-247 | in isoform 3, isoform 4, isoform 6, isoform 7, isoform 9 and isoform 11 | |||
Sequence: SRWESFWMNRENEDAEDVIVNRYIQEIPSTLKSAVYSSQGSEAEEEEPEEEDDSPRDDNL → R | ||||||
Compositional bias | 229-245 | Acidic residues | ||||
Sequence: EAEEEEPEEEDDSPRDD | ||||||
Sequence conflict | 238 | in Ref. 7; AAH28353 | ||||
Sequence: E → D | ||||||
Sequence conflict | 273 | in Ref. 1; AAG15427 | ||||
Sequence: I → T | ||||||
Sequence conflict | 489 | in Ref. 3; BAD96815 | ||||
Sequence: L → S | ||||||
Alternative sequence | VSP_056777 | 665-682 | in isoform 9 | |||
Sequence: Missing | ||||||
Sequence conflict | 687 | in Ref. 1; AAG15428 | ||||
Sequence: R → Q | ||||||
Sequence conflict | 773 | in Ref. 4; BAG54015 | ||||
Sequence: S → P | ||||||
Sequence conflict | 843 | in Ref. 4; BAG54015 | ||||
Sequence: E → G | ||||||
Sequence conflict | 907 | in Ref. 1; AAG15428 | ||||
Sequence: A → V | ||||||
Alternative sequence | VSP_043311 | 930 | in isoform 4, isoform 6, isoform 9 and isoform 10 | |||
Sequence: Q → QA | ||||||
Sequence conflict | 996 | in Ref. 1; AAG15427 and 3; BAG60729 | ||||
Sequence: V → VR | ||||||
Alternative sequence | VSP_056778 | 1053-1241 | in isoform 11 | |||
Sequence: Missing | ||||||
Sequence conflict | 1182 | in Ref. 3; BAA91888 and 4; BAG54015 | ||||
Sequence: L → F |
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AF244930 EMBL· GenBank· DDBJ | AAG15427.1 EMBL· GenBank· DDBJ | mRNA | ||
AF244931 EMBL· GenBank· DDBJ | AAG15428.1 EMBL· GenBank· DDBJ | mRNA | ||
AF302154 EMBL· GenBank· DDBJ | AAG13415.1 EMBL· GenBank· DDBJ | mRNA | ||
AK001759 EMBL· GenBank· DDBJ | BAA91888.1 EMBL· GenBank· DDBJ | mRNA | ||
AK293852 EMBL· GenBank· DDBJ | BAG57250.1 EMBL· GenBank· DDBJ | mRNA | ||
AK298526 EMBL· GenBank· DDBJ | BAG60729.1 EMBL· GenBank· DDBJ | mRNA | ||
AK124140 EMBL· GenBank· DDBJ | BAG54015.1 EMBL· GenBank· DDBJ | mRNA | ||
AK223095 EMBL· GenBank· DDBJ | BAD96815.1 EMBL· GenBank· DDBJ | mRNA | ||
AC080007 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AL449212 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
CH471052 EMBL· GenBank· DDBJ | EAW79246.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CH471052 EMBL· GenBank· DDBJ | EAW79247.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CH471052 EMBL· GenBank· DDBJ | EAW79249.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CH471052 EMBL· GenBank· DDBJ | EAW79250.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
BC028353 EMBL· GenBank· DDBJ | AAH28353.1 EMBL· GenBank· DDBJ | mRNA | ||
BC003045 EMBL· GenBank· DDBJ | AAH03045.2 EMBL· GenBank· DDBJ | mRNA | ||
BC004238 EMBL· GenBank· DDBJ | AAH04238.1 EMBL· GenBank· DDBJ | mRNA |