Q9GYK2 · ITBL_CAEEL

  • Protein
    Uncharacterized integrin beta-like protein C05D9.3
  • Status
    UniProtKB reviewed (Swiss-Prot)
  • Amino acids
  • Protein existence
    Evidence at protein level
  • Annotation score
    3/5

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentplasma membrane
Biological Processintegrin-mediated signaling pathway

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Uncharacterized integrin beta-like protein C05D9.3

Gene names

    • ORF names
      C05D9.3

Organism names

  • Taxonomic identifier
  • Strain
    • Bristol N2
  • Taxonomic lineage
    Eukaryota > Metazoa > Ecdysozoa > Nematoda > Chromadorea > Rhabditida > Rhabditina > Rhabditomorpha > Rhabditoidea > Rhabditidae > Peloderinae > Caenorhabditis

Accessions

  • Primary accession
    Q9GYK2

Proteomes

Organism-specific databases

Subcellular Location

Membrane
; Single-pass type I membrane protein

Features

Showing features for topological domain, transmembrane.

TypeIDPosition(s)Description
Topological domain17-402Extracellular
Transmembrane403-421Helical
Topological domain422-423Cytoplasmic

Keywords

PTM/Processing

Features

Showing features for signal, chain, disulfide bond, glycosylation.

TypeIDPosition(s)Description
Signal1-16
ChainPRO_000025056017-423Uncharacterized integrin beta-like protein C05D9.3
Disulfide bond24↔217
Disulfide bond33↔43
Disulfide bond36↔68
Disulfide bond46↔57
Glycosylation65N-linked (GlcNAc...) asparagine
Disulfide bond219↔238
Disulfide bond230↔241
Disulfide bond243↔252
Disulfide bond254↔288
Disulfide bond271↔286
Glycosylation274N-linked (GlcNAc...) asparagine
Disulfide bond280↔291
Disulfide bond293↔303
Disulfide bond305↔327
Glycosylation307N-linked (GlcNAc...) asparagine
Disulfide bond310↔325
Disulfide bond319↔330
Disulfide bond332↔341
Disulfide bond343↔350

Keywords

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region, domain, compositional bias.

TypeIDPosition(s)Description
Region215-350Cysteine-rich tandem repeats
Domain219-253I-EGF 1
Domain254-304I-EGF 2
Domain305-342I-EGF 3
Region354-406Disordered
Compositional bias356-396Basic and acidic residues

Sequence similarities

Belongs to the integrin beta chain family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.
  • Length
    423
  • Mass (Da)
    46,223
  • Last updated
    2004-03-01 v3
  • Checksum
    0690DA1C7E279C77
MKSRIFFITLLTIVAAQESADQLCSSFDAQQSCGQCIKAHAECAWCIDPHSSLTNRCQLKSKFTNETCTPHLVYSPQTAQVKIQQNLPLETKQHDGKTIVRQQPQAVSVRLMPSHSATVSFKYLHQTDPSRRSTEPETMEIQTSDVKDTPLQLKFFIVCDGELKETKSCRVQNNQIVEFKIEVLVNSCSSTGDITLSVGILRQRTIAGLYVTTICGCECEKHPEINSRLCHQNGHLVCGQCVCDQSRGGDKCECPLASHGVSKASELEDKCRFNSSSPVCSASGKCKCGQCQCNKPTVTGKFCQCDNDSCPLAVNGKVCSGNGVCDCGVCKCEMGWERDDCSCSTASNNCVDNGTPAPEEKDKPESVPEEPEATEKPDDMPSDSDLEKELDESSSAKEEQTSSSGVVSRVCVLLTFFLLVLNF

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
A0A4V0IN84A0A4V0IN84_CAEELC05D9.3453

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias356-396Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
FO080359
EMBL· GenBank· DDBJ
CCD63144.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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