Q9GYK2 · ITBL_CAEEL
- ProteinUncharacterized integrin beta-like protein C05D9.3
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids423 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score3/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | plasma membrane | |
Biological Process | integrin-mediated signaling pathway |
Keywords
- Molecular function
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameUncharacterized integrin beta-like protein C05D9.3
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageEukaryota > Metazoa > Ecdysozoa > Nematoda > Chromadorea > Rhabditida > Rhabditina > Rhabditomorpha > Rhabditoidea > Rhabditidae > Peloderinae > Caenorhabditis
Accessions
- Primary accessionQ9GYK2
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Membrane ; Single-pass type I membrane protein
Features
Showing features for topological domain, transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Topological domain | 17-402 | Extracellular | ||||
Sequence: QESADQLCSSFDAQQSCGQCIKAHAECAWCIDPHSSLTNRCQLKSKFTNETCTPHLVYSPQTAQVKIQQNLPLETKQHDGKTIVRQQPQAVSVRLMPSHSATVSFKYLHQTDPSRRSTEPETMEIQTSDVKDTPLQLKFFIVCDGELKETKSCRVQNNQIVEFKIEVLVNSCSSTGDITLSVGILRQRTIAGLYVTTICGCECEKHPEINSRLCHQNGHLVCGQCVCDQSRGGDKCECPLASHGVSKASELEDKCRFNSSSPVCSASGKCKCGQCQCNKPTVTGKFCQCDNDSCPLAVNGKVCSGNGVCDCGVCKCEMGWERDDCSCSTASNNCVDNGTPAPEEKDKPESVPEEPEATEKPDDMPSDSDLEKELDESSSAKEEQTS | ||||||
Transmembrane | 403-421 | Helical | ||||
Sequence: SSGVVSRVCVLLTFFLLVL | ||||||
Topological domain | 422-423 | Cytoplasmic | ||||
Sequence: NF |
Keywords
- Cellular component
PTM/Processing
Features
Showing features for signal, chain, disulfide bond, glycosylation.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Signal | 1-16 | |||||
Sequence: MKSRIFFITLLTIVAA | ||||||
Chain | PRO_0000250560 | 17-423 | Uncharacterized integrin beta-like protein C05D9.3 | |||
Sequence: QESADQLCSSFDAQQSCGQCIKAHAECAWCIDPHSSLTNRCQLKSKFTNETCTPHLVYSPQTAQVKIQQNLPLETKQHDGKTIVRQQPQAVSVRLMPSHSATVSFKYLHQTDPSRRSTEPETMEIQTSDVKDTPLQLKFFIVCDGELKETKSCRVQNNQIVEFKIEVLVNSCSSTGDITLSVGILRQRTIAGLYVTTICGCECEKHPEINSRLCHQNGHLVCGQCVCDQSRGGDKCECPLASHGVSKASELEDKCRFNSSSPVCSASGKCKCGQCQCNKPTVTGKFCQCDNDSCPLAVNGKVCSGNGVCDCGVCKCEMGWERDDCSCSTASNNCVDNGTPAPEEKDKPESVPEEPEATEKPDDMPSDSDLEKELDESSSAKEEQTSSSGVVSRVCVLLTFFLLVLNF | ||||||
Disulfide bond | 24↔217 | |||||
Sequence: CSSFDAQQSCGQCIKAHAECAWCIDPHSSLTNRCQLKSKFTNETCTPHLVYSPQTAQVKIQQNLPLETKQHDGKTIVRQQPQAVSVRLMPSHSATVSFKYLHQTDPSRRSTEPETMEIQTSDVKDTPLQLKFFIVCDGELKETKSCRVQNNQIVEFKIEVLVNSCSSTGDITLSVGILRQRTIAGLYVTTICGC | ||||||
Disulfide bond | 33↔43 | |||||
Sequence: CGQCIKAHAEC | ||||||
Disulfide bond | 36↔68 | |||||
Sequence: CIKAHAECAWCIDPHSSLTNRCQLKSKFTNETC | ||||||
Disulfide bond | 46↔57 | |||||
Sequence: CIDPHSSLTNRC | ||||||
Glycosylation | 65 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Disulfide bond | 219↔238 | |||||
Sequence: CEKHPEINSRLCHQNGHLVC | ||||||
Disulfide bond | 230↔241 | |||||
Sequence: CHQNGHLVCGQC | ||||||
Disulfide bond | 243↔252 | |||||
Sequence: CDQSRGGDKC | ||||||
Disulfide bond | 254↔288 | |||||
Sequence: CPLASHGVSKASELEDKCRFNSSSPVCSASGKCKC | ||||||
Disulfide bond | 271↔286 | |||||
Sequence: CRFNSSSPVCSASGKC | ||||||
Glycosylation | 274 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Disulfide bond | 280↔291 | |||||
Sequence: CSASGKCKCGQC | ||||||
Disulfide bond | 293↔303 | |||||
Sequence: CNKPTVTGKFC | ||||||
Disulfide bond | 305↔327 | |||||
Sequence: CDNDSCPLAVNGKVCSGNGVCDC | ||||||
Glycosylation | 307 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Disulfide bond | 310↔325 | |||||
Sequence: CPLAVNGKVCSGNGVC | ||||||
Disulfide bond | 319↔330 | |||||
Sequence: CSGNGVCDCGVC | ||||||
Disulfide bond | 332↔341 | |||||
Sequence: CEMGWERDDC | ||||||
Disulfide bond | 343↔350 | |||||
Sequence: CSTASNNC |
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for region, domain, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 215-350 | Cysteine-rich tandem repeats | ||||
Sequence: CGCECEKHPEINSRLCHQNGHLVCGQCVCDQSRGGDKCECPLASHGVSKASELEDKCRFNSSSPVCSASGKCKCGQCQCNKPTVTGKFCQCDNDSCPLAVNGKVCSGNGVCDCGVCKCEMGWERDDCSCSTASNNC | ||||||
Domain | 219-253 | I-EGF 1 | ||||
Sequence: CEKHPEINSRLCHQNGHLVCGQCVCDQSRGGDKCE | ||||||
Domain | 254-304 | I-EGF 2 | ||||
Sequence: CPLASHGVSKASELEDKCRFNSSSPVCSASGKCKCGQCQCNKPTVTGKFCQ | ||||||
Domain | 305-342 | I-EGF 3 | ||||
Sequence: CDNDSCPLAVNGKVCSGNGVCDCGVCKCEMGWERDDCS | ||||||
Region | 354-406 | Disordered | ||||
Sequence: GTPAPEEKDKPESVPEEPEATEKPDDMPSDSDLEKELDESSSAKEEQTSSSGV | ||||||
Compositional bias | 356-396 | Basic and acidic residues | ||||
Sequence: PAPEEKDKPESVPEEPEATEKPDDMPSDSDLEKELDESSSA |
Sequence similarities
Belongs to the integrin beta chain family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
- Length423
- Mass (Da)46,223
- Last updated2004-03-01 v3
- Checksum0690DA1C7E279C77
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A4V0IN84 | A0A4V0IN84_CAEEL | C05D9.3 | 453 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 356-396 | Basic and acidic residues | ||||
Sequence: PAPEEKDKPESVPEEPEATEKPDDMPSDSDLEKELDESSSA |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
FO080359 EMBL· GenBank· DDBJ | CCD63144.1 EMBL· GenBank· DDBJ | Genomic DNA |