Q9FZ92 · RH44_ARATH

Function

Caution

Lacks the conserved Q motif, which is one of the features of the DEAD box helicase family.
Could be the product of a pseudogene.

Catalytic activity

Features

Showing features for binding site.

162250100150200250300350400450500550600
TypeIDPosition(s)Description
Binding site254-261ATP (UniProtKB | ChEBI)

GO annotations

AspectTerm
Cellular Componentcatalytic step 2 spliceosome
Molecular FunctionATP binding
Molecular FunctionATP hydrolysis activity
Molecular FunctionmRNA binding
Molecular FunctionRNA helicase activity
Biological ProcessmRNA splicing, via spliceosome

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Putative DEAD-box ATP-dependent RNA helicase 44
  • EC number

Gene names

    • Name
      RH44
    • ORF names
      F3H9.16
    • Ordered locus names
      At1g28180

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q9FZ92
  • Secondary accessions
    • F4HWI1

Proteomes

Organism-specific databases

Subcellular Location

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00002391841-622Putative DEAD-box ATP-dependent RNA helicase 44

Proteomic databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region, compositional bias, domain, motif.

TypeIDPosition(s)Description
Region50-97Disordered
Compositional bias64-97Basic and acidic residues
Domain241-436Helicase ATP-binding
Motif367-370DEAD box
Domain460-606Helicase C-terminal

Sequence similarities

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    622
  • Mass (Da)
    72,674
  • Last updated
    2006-05-30 v2
  • Checksum
    62385095F42EB099
MKQSFEGFMKTAMEKKTLDFDNLTKPVFLTKAHRKELALKRCQDEIADRDRRSIVQISRSNSDNDDGNRPRDVKRERHRSHDHDRNRESDREFREREVKARVEKLEMVKREKEINAMKEQYLGTTKPKKRVIMKPSKNFRFDWENTEDTLSGEMNVLYQNPHEAQPLFGRGCRAGIDRREQKKLMTGKHEREKREEEDKHWSEKKLEEMNERDWRIFKEDFNISYRGSKIPHPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLARKFLRNPVVVTIGETTKFITQQVIMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKLNECNSLVPPELARHEASKFKPGTFPDRFSHF

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
A0A1P8ANU3A0A1P8ANU3_ARATHAt1g28180121

Sequence caution

The sequence AAF98437.1 differs from that shown. Reason: Erroneous initiation Truncated N-terminus.

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias64-97Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AC021044
EMBL· GenBank· DDBJ
AAF98437.1
EMBL· GenBank· DDBJ
Genomic DNA Different initiation
CP002684
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.

Similar Proteins

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