Q9FZ92 · RH44_ARATH
- ProteinPutative DEAD-box ATP-dependent RNA helicase 44
- GeneRH44
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids622 (go to sequence)
- Protein existenceUncertain
- Annotation score3/5
Function
Catalytic activity
- ATP + H2O = ADP + phosphate + H+
Features
Showing features for binding site.
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | catalytic step 2 spliceosome | |
Molecular Function | ATP binding | |
Molecular Function | ATP hydrolysis activity | |
Molecular Function | mRNA binding | |
Molecular Function | RNA helicase activity | |
Biological Process | mRNA splicing, via spliceosome |
Keywords
- Molecular function
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended namePutative DEAD-box ATP-dependent RNA helicase 44
- EC number
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9FZ92
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000239184 | 1-622 | Putative DEAD-box ATP-dependent RNA helicase 44 | |||
Sequence: MKQSFEGFMKTAMEKKTLDFDNLTKPVFLTKAHRKELALKRCQDEIADRDRRSIVQISRSNSDNDDGNRPRDVKRERHRSHDHDRNRESDREFREREVKARVEKLEMVKREKEINAMKEQYLGTTKPKKRVIMKPSKNFRFDWENTEDTLSGEMNVLYQNPHEAQPLFGRGCRAGIDRREQKKLMTGKHEREKREEEDKHWSEKKLEEMNERDWRIFKEDFNISYRGSKIPHPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLARKFLRNPVVVTIGETTKFITQQVIMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKLNECNSLVPPELARHEASKFKPGTFPDRFSHF |
Proteomic databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain, motif.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 50-97 | Disordered | ||||
Sequence: DRRSIVQISRSNSDNDDGNRPRDVKRERHRSHDHDRNRESDREFRERE | ||||||
Compositional bias | 64-97 | Basic and acidic residues | ||||
Sequence: NDDGNRPRDVKRERHRSHDHDRNRESDREFRERE | ||||||
Domain | 241-436 | Helicase ATP-binding | ||||
Sequence: IPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTYMFSATMLLSVERLARKFLRNPVVV | ||||||
Motif | 367-370 | DEAD box | ||||
Sequence: DEAD | ||||||
Domain | 460-606 | Helicase C-terminal | ||||
Sequence: RLKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKLNECNSLVPPELARHE |
Sequence similarities
Belongs to the DEAD box helicase family. DDX23/PRP28 subfamily.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length622
- Mass (Da)72,674
- Last updated2006-05-30 v2
- Checksum62385095F42EB099
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A1P8ANU3 | A0A1P8ANU3_ARATH | At1g28180 | 121 |
Sequence caution
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 64-97 | Basic and acidic residues | ||||
Sequence: NDDGNRPRDVKRERHRSHDHDRNRESDREFRERE |
Keywords
- Technical term