Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R.[...], Davis R.W.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]Straincv. ColumbiaCategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNature 408:816-820 (2000)Cited in99+99+
Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S., Town C.D.View abstractCited forGENOME REANNOTATIONStraincv. ColumbiaCategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant J. 89:789-804 (2017)Cited in99+99+
Empirical analysis of transcriptional activity in the Arabidopsis genome.Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J.[...], Ecker J.R.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]Straincv. ColumbiaCategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 302:842-846 (2003)Cited in99+Mapped to2
Full-length cDNA from Arabidopsis thaliana.Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B., Feldmann K.A.Cited forNUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 476-794CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)Submission Submitted to EMBL/GenBank/DDBJ databases (MAR-2002)Cited in99+
Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M.[...], Shinozaki K.Cited forNUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 711-794Straincv. ColumbiaCategorySequencesSourceUniProtKB reviewed (Swiss-Prot)Submission Submitted to EMBL/GenBank/DDBJ databases (MAR-2005)Cited in99+99+
Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry.Nuehse T.S., Stensballe A., Jensen O.N., Peck S.C.View abstractCited forPHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-193 AND SER-195, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]Straincv. La-0CategoriesPTM / Processing, SequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCMol. Cell. Proteomics 2:1234-1243 (2003)Cited in7143Mapped to99+
Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database.Nuehse T.S., Stensballe A., Jensen O.N., Peck S.C.View abstractCited forPHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-193 AND SER-195, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]CategoriesPTM / Processing, SequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant Cell 16:2394-2405 (2004)Cited in8759Mapped to22
Genome-wide comparative analysis of the IQD gene families in Arabidopsis thaliana and Oryza sativa.Abel S., Savchenko T., Levy M.View abstractCited forINTERACTION WITH CALMODULIN, GENE FAMILY, NOMENCLATURECategoriesNames, InteractionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCBMC Evol. Biol. 5:72-72 (2005)Cited in33Mapped to15
Temporal analysis of sucrose-induced phosphorylation changes in plasma membrane proteins of Arabidopsis.Niittylae T., Fuglsang A.T., Palmgren M.G., Frommer W.B., Schulze W.X.View abstractCited forIDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]TissueSeedlingCategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCMol. Cell. Proteomics 6:1711-1726 (2007)Cited in2315Mapped to99+
Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis.de la Fuente van Bentem S., Anrather D., Dohnal I., Roitinger E., Csaszar E., Joore J., Buijnink J., Carreri A., Forzani C.[...], Hirt H.View abstractCited forPHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-78; SER-80; SER-459 AND SER-502, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]TissueRootCategoriesPTM / Processing, SequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCJ. Proteome Res. 7:2458-2470 (2008)Cited in99+99+Mapped to99+
Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana.Jones A.M.E., MacLean D., Studholme D.J., Serna-Sanz A., Andreasson E., Rathjen J.P., Peck S.C.View abstractCited forPHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-369 AND SER-459, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]Straincv. ColumbiaCategoriesPTM / Processing, SequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCJ. Proteomics 72:439-451 (2009)Cited in99+99+
Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A., Grossmann J., Gruissem W., Baginsky S.View abstractCited forPHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-142; SER-193; SER-459 AND SER-544, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]CategoriesPTM / Processing, SequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant Physiol. 150:889-903 (2009)Cited in99+99+Mapped to1
Purification and characterization of novel microtubule-associated proteins from Arabidopsis cell suspension cultures.Hamada T., Nagasaki-Takeuchi N., Kato T., Fujiwara M., Sonobe S., Fukao Y., Hashimoto T.View abstractCited forSUBCELLULAR LOCATIONCategorySubcellular LocationSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant Physiol. 163:1804-1816 (2013)Cited in4Mapped to25
The IQD family of calmodulin-binding proteins links calcium signaling to microtubules, membrane subdomains, and the nucleus.Buerstenbinder K., Moeller B., Ploetner R., Stamm G., Hause G., Mitra D., Abel S.View abstractCited forSUBCELLULAR LOCATION, INTERACTION WITH CALMODULINStraincv. ColumbiaCategoriesInteraction, Subcellular LocationSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant Physiol. 173:1692-1708 (2017)Cited in33Mapped to12
Functions of IQD proteins as hubs in cellular calcium and auxin signaling: A toolbox for shape formation and tissue-specification in plants?Buerstenbinder K., Mitra D., Quegwer J.View abstractCited forREVIEWSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant Signal. Behav. 12:E1331198-E1331198 (2017)Cited in33Mapped to11
Calcium-dependent protein kinases from Arabidopsis show substrate specificity differences in an analysis of 103 substrates.Curran A., Chang I.-F., Chang C.-L., Garg S., Miguel R.M., Barron Y.D., Li Y., Romanowsky S., Cushman J.C.[...], Harper J.F.View abstractCategoryPTM / ProcessingSourceTAIR: AT1G19870PubMedEurope PMCFront. Plant Sci. 2:36-36 (2011)Cited in4Mapped to99+
In planta changes in protein phosphorylation induced by the plant hormone abscisic acid.Kline K.G., Barrett-Wilt G.A., Sussman M.R.View abstractCategoryPTM / ProcessingSourceTAIR: AT1G19870PubMedEurope PMCProc Natl Acad Sci U S A 107:15986-15991 (2010)Mapped to99+
Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.Ascencio-Ibanez J.T., Sozzani R., Lee T.J., Chu T.M., Wolfinger R.D., Cella R., Hanley-Bowdoin L.View abstractCategoryExpressionSourceTAIR: AT1G19870PubMedEurope PMCPlant Physiol 148:436-454 (2008)Mapped to99+
A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome.Marmagne A., Ferro M., Meinnel T., Bruley C., Kuhn L., Garin J., Barbier-Brygoo H., Ephritikhine G.View abstractCategoriesPTM / Processing, Subcellular LocationSourceTAIR: AT1G19870PubMedEurope PMCMol. Cell. Proteomics 6:1980-1996 (2007)Cited in27Mapped to99+
Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis.Benschop J.J., Mohammed S., O'Flaherty M., Heck A.J., Slijper M., Menke F.L.View abstractCategoryPTM / ProcessingSourceTAIR: AT1G19870PubMedEurope PMCMol Cell Proteomics 6:1198-1214 (2007)Mapped to99+
A quantitative analysis of Arabidopsis plasma membrane using trypsin- catalyzed (18)O labeling.Nelson C.J., Hegeman A.D., Harms A.C., Sussman M.R.View abstractCategorySubcellular LocationSourceTAIR: AT1G19870PubMedEurope PMCMol Cell Proteomics 5:1382-1395 (2006)Mapped to99+
Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.Dal Bosco C., Lezhneva L., Biehl A., Leister D., Strotmann H., Wanner G., Meurer J.View abstractCategorySequencesSourceTAIR: AT1G19870PubMedEurope PMCJ Biol Chem 279:1060-1069 (2004)Mapped to99+
Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis.Froehlich J.E., Wilkerson C.G., Ray W.K., McAndrew R.S., Osteryoung K.W., Gage D.A., Phinney B.S.View abstractCategorySubcellular LocationSourceTAIR: AT1G19870PubMedEurope PMCJ Proteome Res 2:413-425 (2003)Mapped to99+