Q9FNL2 · PP418_ARATH
- ProteinPentatricopeptide repeat-containing protein At5g46100
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids472 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score1/5
Function
Names & Taxonomy
Protein names
- Recommended namePentatricopeptide repeat-containing protein At5g46100
Gene names
Organism names
- Strain
- Taxonomic lineagecellular organisms > Eukaryota (eucaryotes) > Viridiplantae > Streptophyta > Streptophytina > Embryophyta > Tracheophyta > Euphyllophyta > Spermatophyta > Magnoliopsida (flowering plants) > Mesangiospermae > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae (mustard family) > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9FNL2
Proteomes
Organism-specific databases
Genome annotation databases
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000363555 | 1-472 | Pentatricopeptide repeat-containing protein At5g46100 | |||
Sequence: MGSKVMMFKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDLDI |
Proteomic databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for repeat.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Repeat | 50-84 | PPR 1 | ||||
Sequence: DQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVV | ||||||
Repeat | 85-119 | PPR 2 | ||||
Sequence: SEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDP | ||||||
Repeat | 120-154 | PPR 3 | ||||
Sequence: SQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPP | ||||||
Repeat | 155-190 | PPR 4 | ||||
Sequence: TVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDP | ||||||
Repeat | 191-225 | PPR 5 | ||||
Sequence: DSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP | ||||||
Repeat | 226-260 | PPR 6 | ||||
Sequence: TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEP | ||||||
Repeat | 261-295 | PPR 7 | ||||
Sequence: NVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP | ||||||
Repeat | 296-330 | PPR 8 | ||||
Sequence: NMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKP | ||||||
Repeat | 331-365 | PPR 9 | ||||
Sequence: DAGLYGKVISGFCAISKFREAANFLDEMILGGITP | ||||||
Repeat | 373-406 | PPR 10 | ||||
Sequence: HVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISV | ||||||
Repeat | 407-441 | PPR 11 | ||||
Sequence: EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIP |
Sequence similarities
Belongs to the PPR family. P subfamily.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length472
- Mass (Da)52,879
- Last updated2001-03-01 v1
- Checksum7F5B154DAAE928A8
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AB006698 EMBL· GenBank· DDBJ | BAB08255.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002688 EMBL· GenBank· DDBJ | AED95337.1 EMBL· GenBank· DDBJ | Genomic DNA |