Q9FE29 · CSPLM_ARATH
- ProteinCASP-like protein 1D1
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids193 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score3/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Aspect | Term | |
---|---|---|
Cellular Component | endosome | |
Cellular Component | Golgi apparatus | |
Cellular Component | plasma membrane | |
Cellular Component | trans-Golgi network |
Names & Taxonomy
Protein names
- Recommended nameCASP-like protein 1D1
- Short namesAtCASPL1D1
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionQ9FE29
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Cell membrane ; Multi-pass membrane protein
Features
Showing features for topological domain, transmembrane.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Topological domain | 1-30 | Cytoplasmic | |||
Transmembrane | 31-51 | Helical | |||
Topological domain | 52-76 | Extracellular | |||
Transmembrane | 77-97 | Helical | |||
Topological domain | 98-108 | Cytoplasmic | |||
Transmembrane | 109-129 | Helical | |||
Topological domain | 130-162 | Extracellular | |||
Transmembrane | 163-183 | Helical | |||
Topological domain | 184-193 | Cytoplasmic | |||
Keywords
- Cellular component
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Chain | PRO_0000308675 | 1-193 | CASP-like protein 1D1 | ||
Proteomic databases
PTM databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for region.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Region | 1-24 | Disordered | |||
Sequence similarities
Belongs to the Casparian strip membrane proteins (CASP) family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length193
- Mass (Da)20,524
- Last updated2001-03-01 v1
- ChecksumB5A72954F73E57DD
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A1P8B7Z3 | A0A1P8B7Z3_ARATH | CASPL1D1 | 137 |
Sequence caution
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
Z97339 EMBL· GenBank· DDBJ | CAB10339.1 EMBL· GenBank· DDBJ | Genomic DNA | Different initiation | |
AL161542 EMBL· GenBank· DDBJ | CAB78603.1 EMBL· GenBank· DDBJ | Genomic DNA | Different initiation | |
CP002687 EMBL· GenBank· DDBJ | AEE83628.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AF324722 EMBL· GenBank· DDBJ | AAG40073.2 EMBL· GenBank· DDBJ | mRNA | Different initiation | |
AF326884 EMBL· GenBank· DDBJ | AAG41466.1 EMBL· GenBank· DDBJ | mRNA | ||
AY113938 EMBL· GenBank· DDBJ | AAM44986.1 EMBL· GenBank· DDBJ | mRNA | ||
AK226478 EMBL· GenBank· DDBJ | BAE98620.1 EMBL· GenBank· DDBJ | mRNA | ||
AY086594 EMBL· GenBank· DDBJ | AAM63654.1 EMBL· GenBank· DDBJ | mRNA |