Q9FE29 · CSPLM_ARATH

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentendosome
Cellular ComponentGolgi apparatus
Cellular Componentplasma membrane
Cellular Componenttrans-Golgi network

Names & Taxonomy

Protein names

  • Recommended name
    CASP-like protein 1D1
  • Short names
    AtCASPL1D1

Gene names

    • ORF names
      Dl3845w, FCAALL.139
    • Ordered locus names
      At4g15610

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q9FE29
  • Secondary accessions
    • O23412

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Features

Showing features for topological domain, transmembrane.

Type
IDPosition(s)Description
Topological domain1-30Cytoplasmic
Transmembrane31-51Helical
Topological domain52-76Extracellular
Transmembrane77-97Helical
Topological domain98-108Cytoplasmic
Transmembrane109-129Helical
Topological domain130-162Extracellular
Transmembrane163-183Helical
Topological domain184-193Cytoplasmic

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00003086751-193CASP-like protein 1D1

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Subunit

Homodimer and heterodimers.

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region.

TypeIDPosition(s)Description
Region1-24Disordered

Sequence similarities

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    193
  • Mass (Da)
    20,524
  • Last updated
    2001-03-01 v1
  • Checksum
    B5A72954F73E57DD
MGYETKSTLDTERSTAPGTGTTTKSCSMTQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPAAEFTNSPALIYFVVALSVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKKIR

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
A0A1P8B7Z3A0A1P8B7Z3_ARATHCASPL1D1137

Sequence caution

The sequence AAG40073.2 differs from that shown. Reason: Erroneous initiation Truncated N-terminus.
The sequence CAB10339.1 differs from that shown. Reason: Erroneous initiation Truncated N-terminus.
The sequence CAB78603.1 differs from that shown. Reason: Erroneous initiation Truncated N-terminus.

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
Z97339
EMBL· GenBank· DDBJ
CAB10339.1
EMBL· GenBank· DDBJ
Genomic DNA Different initiation
AL161542
EMBL· GenBank· DDBJ
CAB78603.1
EMBL· GenBank· DDBJ
Genomic DNA Different initiation
CP002687
EMBL· GenBank· DDBJ
AEE83628.1
EMBL· GenBank· DDBJ
Genomic DNA
AF324722
EMBL· GenBank· DDBJ
AAG40073.2
EMBL· GenBank· DDBJ
mRNA Different initiation
AF326884
EMBL· GenBank· DDBJ
AAG41466.1
EMBL· GenBank· DDBJ
mRNA
AY113938
EMBL· GenBank· DDBJ
AAM44986.1
EMBL· GenBank· DDBJ
mRNA
AK226478
EMBL· GenBank· DDBJ
BAE98620.1
EMBL· GenBank· DDBJ
mRNA
AY086594
EMBL· GenBank· DDBJ
AAM63654.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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