Q9ER88 · RT29_MOUSE

  • Protein
    Small ribosomal subunit protein mS29
  • Gene
    Dap3
  • Status
    UniProtKB reviewed (Swiss-Prot)
  • Amino acids
  • Protein existence
    Evidence at protein level
  • Annotation score
    4/5

Function

function

Involved in mediating interferon-gamma-induced cell death.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentmitochondrial inner membrane
Cellular Componentmitochondrial matrix
Cellular Componentmitochondrial small ribosomal subunit
Cellular Componentmitochondrion
Molecular Functionstructural constituent of ribosome
Biological Processapoptotic mitochondrial changes
Biological Processmitochondrial translation

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Small ribosomal subunit protein mS29
  • Alternative names
    • 28S ribosomal protein S29, mitochondrial (MRP-S29; S29mt)
    • Death-associated protein 3 (DAP-3)

Gene names

    • Name
      Dap3
    • Synonyms
      Mrps29

Organism names

  • Taxonomic identifier
  • Strains
    • C57BL/6J
    • FVB/N
    • NOD
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Mus > Mus

Accessions

  • Primary accession
    Q9ER88
  • Secondary accessions
    • Q8C2B2
    • Q8CCQ8
    • Q8VCK8
    • Q9CRT4
    • Q9CS11
    • Q9D5V9

Proteomes

Organism-specific databases

PTM/Processing

Features

Showing features for transit peptide, chain, modified residue.

TypeIDPosition(s)Description
Transit peptide1-17Mitochondrion
ChainPRO_000008771818-391Small ribosomal subunit protein mS29
Modified residue168N6-acetyllysine
Modified residue200N6-acetyllysine

Keywords

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Subunit

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins. Interacts with DELE1. Interacts with NOA1.
View interactors in UniProtKB
View CPX-5301 in Complex Portal

Protein-protein interaction databases

Miscellaneous

Family & Domains

Features

Showing features for region, compositional bias.

TypeIDPosition(s)Description
Region30-59Disordered
Compositional bias41-58Basic and acidic residues

Sequence similarities

Keywords

Phylogenomic databases

Family and domain databases

Sequence & Isoform

Align isoforms (2)
  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.

This entry describes 2 isoforms produced by Alternative splicing.

Q9ER88-1

This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

  • Length
    391
  • Mass (Da)
    44,699
  • Last updated
    2001-03-01 v1
  • Checksum
    038AC9DA7A61FFF4
MLTGITRLFSRVQKLDPRCFLHMSVQATQNSQVPAERPRTVSRTSDSDPAKHGEQHEGQHYSIPLQDLKTVFPHGLPPRYMMQVKTFGEACLMVRKPALELLGYLKNTNFAHPAVRYLLYGEKGTGKTLSLCHAVHFCARHDWLILHIPDAHLWVKNCRELLQSTHNKQRFDQPLEASTWLKNFKTTNERFLSQIKVQEKYVWNKRESTEKGSPLGEVVEQGLTRVRNATDAVGVVLKELKAQSALGLFHLLVAVDGVNALWGRTTLKKEDRTLIAPEELSLVHNLRKMVKNDWHGGAIVLSLSQTGSLFKSRTAYLPHELLGKEGFNALEPFLPILIPNYNPKEFESSFQYYLENNWLQHEKASTEEGRKELRFLSNCNPEQLERLCASL

Q9ER88-2

  • Name
    2
  • See also
    sequence in UniParc or sequence clusters in UniRef
  • Differences from canonical

Computationally mapped potential isoform sequences

There are 9 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A0R4J1B9A0A0R4J1B9_MOUSEDap3366
G3UZC0G3UZC0_MOUSEDap3212
G3UYM6G3UYM6_MOUSEDap3133
G3UYP3G3UYP3_MOUSEDap366
G3UWZ6G3UWZ6_MOUSEDap3255
G3UWJ4G3UWJ4_MOUSEDap3200
G3UWM7G3UWM7_MOUSEDap3217
G3UWR5G3UWR5_MOUSEDap3165
G3X9M0G3X9M0_MOUSEDap3396

Sequence caution

The sequence BAB29240.3 differs from that shown. Reason: Erroneous initiation Extended N-terminus.
The sequence BAB29605.1 differs from that shown. Reason: Erroneous initiation Extended N-terminus.
The sequence BAC27790.1 differs from that shown. Reason: Erroneous initiation Extended N-terminus.
The sequence BAC40673.1 differs from that shown. Reason: Erroneous initiation Extended N-terminus.

Features

Showing features for compositional bias, sequence conflict, alternative sequence.

TypeIDPosition(s)Description
Compositional bias41-58Basic and acidic residues
Sequence conflict90in Ref. 2; BAB29605
Sequence conflict141in Ref. 2; BAC27790
Sequence conflict177in Ref. 2; BAB29605
Alternative sequenceVSP_008916295-324in isoform 2

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AJ250375
EMBL· GenBank· DDBJ
CAC05583.1
EMBL· GenBank· DDBJ
mRNA
AK014889
EMBL· GenBank· DDBJ
BAB29605.1
EMBL· GenBank· DDBJ
mRNA Different initiation
AK014280
EMBL· GenBank· DDBJ
BAB29240.3
EMBL· GenBank· DDBJ
mRNA Different initiation
AK021250
EMBL· GenBank· DDBJ
-mRNA No translation available.
AK032275
EMBL· GenBank· DDBJ
BAC27790.1
EMBL· GenBank· DDBJ
mRNA Different initiation
AK088960
EMBL· GenBank· DDBJ
BAC40673.1
EMBL· GenBank· DDBJ
mRNA Different initiation
BC019566
EMBL· GenBank· DDBJ
AAH19566.2
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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