Q9CAG3 · LOX6_ARATH

Function

function

Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure (By similarity).
13S-lipoxygenase that can use linolenic acid as substrates

Catalytic activity

Cofactor

Fe cation (UniProtKB | Rhea| CHEBI:24875 )

Note: Binds 1 Fe cation per subunit.

Pathway

Lipid metabolism; oxylipin biosynthesis.

Features

Showing features for binding site.

TypeIDPosition(s)Description
Binding site575Fe cation (UniProtKB | ChEBI); catalytic
Binding site580Fe cation (UniProtKB | ChEBI); catalytic
Binding site767Fe cation (UniProtKB | ChEBI); catalytic
Binding site771Fe cation (UniProtKB | ChEBI); catalytic
Binding site917Fe cation (UniProtKB | ChEBI); catalytic

GO annotations

AspectTerm
Cellular Componentchloroplast
Cellular Componentplasma membrane
Molecular Functionlinoleate 13S-lipoxygenase activity
Molecular Functionmetal ion binding
Biological Processjasmonic acid biosynthetic process
Biological Processlipid oxidation
Biological Processoxylipin biosynthetic process
Biological Processresponse to wounding

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Lipoxygenase 6, chloroplastic
  • EC number
  • Short names
    AtLOX6

Gene names

    • Name
      LOX6
    • ORF names
      F12B7.11
    • Ordered locus names
      At1g67560

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q9CAG3
  • Secondary accessions
    • Q0WLL0
    • Q56WC0

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for transit peptide, chain.

TypeIDPosition(s)Description
Transit peptide1-40Chloroplast
ChainPRO_000038059541-917Lipoxygenase 6, chloroplastic

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region, domain.

TypeIDPosition(s)Description
Region46-66Disordered
Domain98-216PLAT
Domain219-917Lipoxygenase
Region880-904Disordered

Sequence similarities

Belongs to the lipoxygenase family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.
  • Length
    917
  • Mass (Da)
    104,516
  • Last updated
    2001-06-01 v1
  • Checksum
    14405AD036EC3F64
MFVASPVKTNFNGVSLVKSPAFSALSCRKQHRVPISRQVRAVISREEKAVDQEDGKKSTNKPLINSSQFPWQRSKYTGSKTVTAVVKIRKKIKEKLTERFEHQLELFMKAIGQGMLIQLVSEEIDPETGKGRKSLESPVMGLPKAVKDPRYLVFTADFTVPINFGKPGAILVTNLLSTEICLSEIIIEDSTDTILFPANTWIHSKNDNPQARIIFRSQPCLPSETPDGIKELREKDLVSVRGDGKGERKPHERIYDYDVYNDLGDPRKTERVRPVLGVPETPYPRRCRTGRPLVSKDPPCESRGKEKEEFYVPRDEVFEEIKRDTFRAGRFKALFHNLVPSIAAALSNLDIPFTCFSDIDNLYKSNIVLGHTEPKDTGLGGFIGGFMNGILNVTETLLKYDTPAVIKWDRFAWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQESVLTEEIIAREVEHYGTTIEKALEEKRLFLVDYHDILLPFVEKINSIKEDPRKTYASRTIFFYSKNGALRPLAIELSLPPTAESENKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHASMEPYIIATNRQLSTMHPVYKLLHPHMRYTLEINARARKSLINGGGIIESCFTPGKYAMELSSAAYKSMWRFDMEGLPADLVRRGMAEEDSSAECGVRLVIDDYPYAADGLLIWKAIKDLVESYVKHFYSDSKSITSDLELQAWWDEIKNKGHYDKKDEPWWPKLNTTQDLSQILTNMIWIASGQHAAINFGQYPFGGYVPNRPTLLRKLIPQETDPDYEMFMRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVKYFNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI

Sequence caution

The sequence BAD95111.1 differs from that shown. Reason: Erroneous initiation Truncated N-terminus.

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AJ748537
EMBL· GenBank· DDBJ
CAG38328.1
EMBL· GenBank· DDBJ
mRNA
AC011020
EMBL· GenBank· DDBJ
AAG52309.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002684
EMBL· GenBank· DDBJ
AEE34664.1
EMBL· GenBank· DDBJ
Genomic DNA
AY081253
EMBL· GenBank· DDBJ
AAL91142.1
EMBL· GenBank· DDBJ
mRNA
BT010546
EMBL· GenBank· DDBJ
AAQ65169.1
EMBL· GenBank· DDBJ
mRNA
AK222124
EMBL· GenBank· DDBJ
BAD95111.1
EMBL· GenBank· DDBJ
mRNA Different initiation
AK230188
EMBL· GenBank· DDBJ
BAF01997.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

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