Q9C5G2 · Q9C5G2_ARATH

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Biological ProcessmRNA processing
Biological ProcessRNA splicing

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Protein-protein interaction regulator family protein

Gene names

    • ORF names
      F9L1.14
      , F9L1_14
    • Ordered locus names
      At1g15200

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q9C5G2

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Keywords

  • Cellular component

PTM/Processing

PTM databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for compositional bias, region, domain, coiled coil.

TypeIDPosition(s)Description
Compositional bias18-37Basic and acidic residues
Region18-162Disordered
Compositional bias54-91Basic and acidic residues
Compositional bias114-139Basic and acidic residues
Domain160-288Pinin/SDK/MemA protein
Coiled coil190-217
Compositional bias350-367Basic and acidic residues
Region350-384Disordered
Compositional bias368-384Acidic residues
Region397-423Disordered

Sequence similarities

Belongs to the pinin family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    423
  • Mass (Da)
    48,905
  • Last updated
    2001-06-01 v1
  • Checksum
    B5D0C8F3EF70491E
MGDTALEKTAEELRHEIDELHRQQREITERLRDPRGLRRGGFSNVAPRNQGRRGFPRPAERNDVEDEPPAKRRLSSAVVKVDGEDVSKDGEFPVDGNGTQVKVGENGTSDQSDKKQSGLHRGSWSQRDAEQRRTNKRYEAFALPEPAPRVLPKNEDPKLVNRNRRMLGNLLGTLEKFRKEDKQRSGTDAYARRTAALQRAEEKAREESERLRLQERENLTEKRRRDLTLRARVAAKAEQKKLELLFLQWSEHQKKLSNFIRTKAEPRIYYAPVKPLEEDTSEVEQQKERTFLEWKAARRQEVSEYQKEIEEQCLGNVEKELERWQNARKARKANNEGMNLQETMDKELETHRMEHGPKKRKIPGGGVGDEDEEDEVEDINGGEDEMIMDDLLEEGGDGTIKEEVATDTVKAEAVEEDIKHEVL

Computationally mapped potential isoform sequences

There are 3 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
F4HZI6F4HZI6_ARATHAt1g15200428
F4HZI7F4HZI7_ARATHAt1g15200442
F4HZI8F4HZI8_ARATHAt1g15200470

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias18-37Basic and acidic residues
Compositional bias54-91Basic and acidic residues
Compositional bias114-139Basic and acidic residues
Compositional bias350-367Basic and acidic residues
Compositional bias368-384Acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AF360275
EMBL· GenBank· DDBJ
AAK25985.1
EMBL· GenBank· DDBJ
mRNA
AY051037
EMBL· GenBank· DDBJ
AAK93714.1
EMBL· GenBank· DDBJ
mRNA
CP002684
EMBL· GenBank· DDBJ
AEE29281.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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