Q9C519 · WRKY6_ARATH

Function

function

Transcription factor involved in the control of processes related to senescence and pathogen defense (PubMed:12000796).
Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:12000796).
Activates the transcription of the SIRK gene and represses its own expression and that of the WRKY42 genes (PubMed:12000796).
Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771).

Features

Showing features for dna binding.

155350100150200250300350400450500550
TypeIDPosition(s)Description
DNA binding306-372WRKY

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity
Molecular Functiontranscription cis-regulatory region binding
Biological Processcellular response to boron-containing substance deprivation
Biological Processcellular response to phosphate starvation
Biological Processethylene-activated signaling pathway
Biological Processnegative regulation of DNA-templated transcription

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    WRKY transcription factor 6
  • Alternative names
    • WRKY DNA-binding protein 6
      (AtWRKY6
      )

Gene names

    • Name
      WRKY6
    • ORF names
      F19K23.22
    • Ordered locus names
      At1g62300

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q9C519
  • Secondary accessions
    • O04594
    • Q9C5T1

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Nucleus

Keywords

Phenotypes & Variants

Features

Showing features for mutagenesis.

TypeIDPosition(s)Description
Mutagenesis278Abolishes nuclear localization.
Mutagenesis296-297No effect on nuclear localization.

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00001336481-553WRKY transcription factor 6

Proteomic databases

PTM databases

Expression

Tissue specificity

Roots, leaves, shoots, flowers and siliques.

Induction

By salicylic acid, ethylene, jasmonic acid, pathogens, wounding and strongly during leaf senescence.

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for compositional bias, region.

Type
IDPosition(s)Description
Compositional bias111-120Basic and acidic residues
Region111-152Disordered
Compositional bias138-147Acidic residues
Region221-292Disordered
Compositional bias254-275Basic and acidic residues
Compositional bias276-292Polar residues
Region431-477Disordered

Sequence similarities

Belongs to the WRKY group II-b family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    553
  • Mass (Da)
    60,593
  • Last updated
    2001-06-01 v1
  • MD5 Checksum
    9B4C3E1096936BCF7BA7951A02E962E6
MDRGWSGLTLDSSSLDLLNPNRISHKNHRRFSNPLAMSRIDEEDDQKTRISTNGSEFRFPVSLSGIRDREDEDFSSGVAGDNDREVPGEVDFFSDKKSRVCREDDEGFRVKKEEQDDRTDVNTGLNLRTTGNTKSDESMIDDGESSEMEDKRAKNELVKLQDELKKMTMDNQKLRELLTQVSNSYTSLQMHLVSLMQQQQQQNNKVIEAAEKPEETIVPRQFIDLGPTRAVGEAEDVSNSSSEDRTRSGGSSAAERRSNGKRLGREESPETESNKIQKVNSTTPTTFDQTAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAAVAMASTTTAAANMLLSGSMSSHDGMMNPTNLLARAVLPCSTSMATISASAPFPTVTLDLTHSPPPPNGSNPSSSAATNNNHNSLMQRPQQQQQQMTNLPPGMLPHVIGQALYNQSKFSGLQFSGGSPSTAAFSQSHAVADTITALTADPNFTAALAAVISSMINGTNHHDGEGNNKNQ

Sequence caution

The sequence AAB60774.1 differs from that shown. Reason: Erroneous gene model prediction

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias111-120Basic and acidic residues
Compositional bias138-147Acidic residues
Compositional bias254-275Basic and acidic residues
Compositional bias276-292Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AF331713
EMBL· GenBank· DDBJ
AAK01128.1
EMBL· GenBank· DDBJ
Genomic DNA
AF331712
EMBL· GenBank· DDBJ
AAK01127.1
EMBL· GenBank· DDBJ
mRNA
AC000375
EMBL· GenBank· DDBJ
AAB60774.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
CP002684
EMBL· GenBank· DDBJ
AEE33948.1
EMBL· GenBank· DDBJ
Genomic DNA
AF224702
EMBL· GenBank· DDBJ
AAK28312.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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