Q96DD7 · SHSA4_HUMAN
- ProteinProtein shisa-4
- GeneSHISA4
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids197 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score4/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | membrane |
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameProtein shisa-4
- Alternative names
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Primates > Haplorrhini > Catarrhini > Hominidae > Homo
Accessions
- Primary accessionQ96DD7
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Membrane ; Single-pass type I membrane protein
Features
Showing features for topological domain, transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Topological domain | 28-87 | Extracellular | ||||
Sequence: GEDCLWYLDRNGSWHPGFNCEFFTFCCGTCYHRYCCRDLTLLITERQQKHCLAFSPKTIA | ||||||
Transmembrane | 88-108 | Helical | ||||
Sequence: GIASAVILFVAVVATTICCFL | ||||||
Topological domain | 109-197 | Cytoplasmic | ||||
Sequence: CSCCYLYRRRQQLQSPFEGQEIPMTGIPVQPVYPYPQDPKAGPAPPQPGFIYPPSGPAPQYPLYPAGPPVYNPAAPPPYMPPQPSYPGA |
Keywords
- Cellular component
Disease & Variants
Features
Showing features for natural variant.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Natural variant | VAR_028811 | 159 | in dbSNP:rs2250377 | |||
Sequence: I → M |
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 218 variants from UniProt as well as other sources including ClinVar and dbSNP.
Organism-specific databases
Miscellaneous
Genetic variation databases
PTM/Processing
Features
Showing features for signal, chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Signal | 1-27 | |||||
Sequence: MPPAGLRRAAPLTAIALLVLGAPLVLA | ||||||
Chain | PRO_0000254090 | 28-197 | Protein shisa-4 | |||
Sequence: GEDCLWYLDRNGSWHPGFNCEFFTFCCGTCYHRYCCRDLTLLITERQQKHCLAFSPKTIAGIASAVILFVAVVATTICCFLCSCCYLYRRRQQLQSPFEGQEIPMTGIPVQPVYPYPQDPKAGPAPPQPGFIYPPSGPAPQYPLYPAGPPVYNPAAPPPYMPPQPSYPGA |
Proteomic databases
PTM databases
Interaction
Binary interactions
Type | Entry 1 | Entry 2 | Number of experiments | Intact | |
---|---|---|---|---|---|
BINARY | Q96DD7 | CNIH1 O95406 | 3 | EBI-18035902, EBI-12172273 | |
BINARY | Q96DD7 | CYBC1 Q9BQA9 | 3 | EBI-18035902, EBI-2680384 | |
BINARY | Q96DD7 | DESI1 Q6ICB0 | 3 | EBI-18035902, EBI-2806959 | |
BINARY | Q96DD7 | MAL P21145 | 3 | EBI-18035902, EBI-3932027 | |
BINARY | Q96DD7 | SGTA O43765 | 3 | EBI-18035902, EBI-347996 | |
BINARY | Q96DD7 | TSPAN33 Q86UF1 | 3 | EBI-18035902, EBI-12045841 | |
BINARY | Q96DD7 | UBE2V1 Q13404 | 3 | EBI-18035902, EBI-1050671 | |
BINARY | Q96DD7 | UPK1B O75841 | 3 | EBI-18035902, EBI-12237619 |
Protein-protein interaction databases
Miscellaneous
Structure
Sequence
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
- Length197
- Mass (Da)21,522
- Last updated2010-11-30 v3
- ChecksumD2D8DDB195D6AD8A
Sequence caution
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AY358589 EMBL· GenBank· DDBJ | AAQ88952.1 EMBL· GenBank· DDBJ | mRNA | ||
AK294106 EMBL· GenBank· DDBJ | BAG57441.1 EMBL· GenBank· DDBJ | mRNA | ||
AK316312 EMBL· GenBank· DDBJ | BAH14683.1 EMBL· GenBank· DDBJ | mRNA | ||
AL513217 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
BC009558 EMBL· GenBank· DDBJ | AAH09558.1 EMBL· GenBank· DDBJ | mRNA | Different initiation | |
BC061908 EMBL· GenBank· DDBJ | AAH61908.1 EMBL· GenBank· DDBJ | mRNA | ||
BC104444 EMBL· GenBank· DDBJ | AAI04445.1 EMBL· GenBank· DDBJ | mRNA | ||
BC104445 EMBL· GenBank· DDBJ | AAI04446.1 EMBL· GenBank· DDBJ | mRNA | ||
BC111855 EMBL· GenBank· DDBJ | AAI11856.1 EMBL· GenBank· DDBJ | mRNA |