Q96AY4 · TTC28_HUMAN
- ProteinTetratricopeptide repeat protein 28
- GeneTTC28
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids2481 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
During mitosis, may be involved in the condensation of spindle midzone microtubules, leading to the formation of midbody.
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | centrosome | |
Cellular Component | cytoplasm | |
Cellular Component | midbody | |
Cellular Component | spindle pole | |
Molecular Function | kinase binding | |
Biological Process | cell division | |
Biological Process | regulation of mitotic cell cycle |
Keywords
- Biological process
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameTetratricopeptide repeat protein 28
- Short namesTPR repeat protein 28
- Alternative names
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Primates > Haplorrhini > Catarrhini > Hominidae > Homo
Accessions
- Primary accessionQ96AY4
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Note: At interphase, localizes to centrosomes. At prometaphase and metaphase, associated with spindle microtubules and spindle poles. At anaphase, accumulates in the spindle midzone. At telophase, condensed on central spindles. During cytokinesis, condensed on the midbody where it colocalizes with AURKB (By similarity).
Keywords
- Cellular component
Disease & Variants
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 2,191 variants from UniProt as well as other sources including ClinVar and dbSNP.
Organism-specific databases
Miscellaneous
Genetic variation databases
PTM/Processing
Features
Showing features for modified residue, chain, modified residue (large scale data).
Type | ID | Position(s) | Source | Description | |||
---|---|---|---|---|---|---|---|
Modified residue | 1 | UniProt | N-acetylmethionine | ||||
Sequence: M | |||||||
Chain | PRO_0000106427 | 1-2481 | UniProt | Tetratricopeptide repeat protein 28 | |||
Sequence: MEQSPPPAPEPTQGPTPARSRRRREPESPPASAPIPLFGADTIGQRSPDGPVLSKAEFVEKVRQSNQACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKIQQYDKALDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDSLEPTYQQLQKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAKDLGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDLHDKLSQAKAYCNLGLAFKALLNFSKAEECQKYLLSLAQSLNNSQAKFRALGNLGDIFICKKDINGAIKFYEQQLGLAHQVKDRRLEASAYAALGTAYRMIQKYDKALGYHTQELEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYEEQLDLGQKLKDPSLEAQVYGNMGITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQIAEETNNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLAAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYRASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYSPVTIDQILEMVNGQRGLVLYYSLAAGYLYSWLLAPGAGIVKFHEHYLGENTVENSSDFQASSSVTLPTATGSALEQHIASVREALGVESHYSRACASSETESEAGDIMDQQFEEMNNKLNSVTDPTGFLRMVRRNNLFNRSCQSMTSLFSNTVSPTQDGTSSLPRRQSSFAKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLKGSSSNEYLYERFGLLAVPSIRSLSVQSKSHLRKNPPTYSSSTSMAAVIGNPKLPSAVMDRWLWGPMPSAEEEAYMVSELLGCQPLVGSVATKERVMSALTQAECVHFATHISWKLSALVLTPSMDGNPASSKSSFGHPYTIPESLRVQDDASDGESISDCPPLQELLLTAADVLDLQLPVKLVVLGSSQESNSKVTADGVIALTRAFLAAGAQCVLVSLWPVPVAASKMFIHAFYSSLLNGLKASAALGEAMKVVQSSKAFSHPSNWAGFMLIGSDVKLNSPSSLIGQALTEILQHPERARDALRVLLHLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPTSGLPAAVFFPTSDPGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQLISRAVKNMVGMLHQVLVQLQAGEKEQDLASAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQANRRTVHFALQSLLSLFDSTELPKRLSLDSSSSLESLASAQSVSNALPLGYQQPPFSPTGADSIASDAISVYSLSSIASSMSFVSKPEGGSEGGGPGGRQDHDRSKNAYLQRSTLPRSQLPPQTRPAGNKDEEEYEGFSIISNEPLATYQENRNTCFSPDHKQPQPGTAGGMRVSVSSKGSISTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEESNPKLDPQELAQKILEETQSHLIAVERLQRSGGQVSKSNNPEDGVQAPSSTAVFRASETSAFSRPVLSHQKSQPSPVTVKPKPPARSSSLPKVSSGYSSPTTSEMSIKDSPSQHSGRPSPGCDSQTSQLDQPLFKLKYPSSPYSAHISKSPRNMSPSSGHQSPAGSAPSPALSYSSAGSARSSPADAPDIDKLKMAAIDEKVQAVHNLKMFWQSTPQHSTGPMKIFRGAPGTMTSKRDVLSLLNLSPRHNKKEEGVDKLELKELSLQQHDGAPPKAPPNGHWRTETTSLGSLPLPAGPPATAPARPLRLPSGNGYKFLSPGRFFPSSKC | |||||||
Modified residue (large scale data) | 4 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 16 | PRIDE | Phosphothreonine | ||||
Sequence: T | |||||||
Modified residue | 28 | UniProt | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 28 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 32 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 47 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1372 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue | 1590 | UniProt | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2079 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2102 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue | 2104 | UniProt | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2104 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2105 | PRIDE | Phosphothreonine | ||||
Sequence: T | |||||||
Modified residue (large scale data) | 2108 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2117 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2120 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue | 2224 | UniProt | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2224 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2227 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue | 2251 | UniProt | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2251 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2271 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2293 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2295 | PRIDE | Phosphotyrosine | ||||
Sequence: Y | |||||||
Modified residue (large scale data) | 2302 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2307 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2335 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2367 | PRIDE | Phosphothreonine | ||||
Sequence: T | |||||||
Modified residue | 2393 | UniProt | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue | 2398 | UniProt | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2398 | PRIDE | Phosphoserine | ||||
Sequence: S |
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Tissue specificity
Widely expressed in fetal tissues. In adult tissues, expressed in testis and ovary and, at much lower levels, in kidney and pancreas.
Gene expression databases
Organism-specific databases
Structure
Family & Domains
Features
Showing features for region, repeat, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-48 | Disordered | ||||
Sequence: MEQSPPPAPEPTQGPTPARSRRRREPESPPASAPIPLFGADTIGQRSP | ||||||
Repeat | 58-91 | TPR 1 | ||||
Sequence: FVEKVRQSNQACHDGDFHTAIVLYNEALAVDPQN | ||||||
Repeat | 93-125 | TPR 2 | ||||
Sequence: ILYSNRSAAYMKIQQYDKALDDAIKARLLNPKW | ||||||
Repeat | 126-159 | TPR 3 | ||||
Sequence: PKAYFRQGVALQYLGRHADALAAFASGLAQDPKS | ||||||
Repeat | 196-229 | TPR 4 | ||||
Sequence: FVVVSVVGQELLTAGHHGASVVVLEAALKIGTCS | ||||||
Repeat | 234-267 | TPR 5 | ||||
Sequence: GSVFSALSSAYWSLGNTEKSTGYMQQDLDVAKTL | ||||||
Repeat | 274-307 | TPR 6 | ||||
Sequence: CRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKL | ||||||
Repeat | 314-347 | TPR 7 | ||||
Sequence: SSALSSLGHVYTAIGDYPNALASHKQCVLLAKQS | ||||||
Repeat | 354-387 | TPR 8 | ||||
Sequence: ARELGNMGAVYIAMGDFENAVQCHEQHLKIAKDL | ||||||
Repeat | 394-427 | TPR 9 | ||||
Sequence: ARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQEL | ||||||
Repeat | 434-467 | TPR 10 | ||||
Sequence: MRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDL | ||||||
Repeat | 474-507 | TPR 11 | ||||
Sequence: GRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL | ||||||
Repeat | 514-547 | TPR 12 | ||||
Sequence: GRAYGNMGNAYNALGMYDQAVKYHRQELQISMEV | ||||||
Repeat | 554-587 | TPR 13 | ||||
Sequence: ASTHGNLAVAYQALGAHDRALQHYQNHLNIAREL | ||||||
Repeat | 594-627 | TPR 14 | ||||
Sequence: ARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDL | ||||||
Repeat | 634-667 | TPR 15 | ||||
Sequence: GKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDL | ||||||
Repeat | 674-707 | TPR 16 | ||||
Sequence: AKAYCNLGLAFKALLNFSKAEECQKYLLSLAQSL | ||||||
Repeat | 714-747 | TPR 17 | ||||
Sequence: FRALGNLGDIFICKKDINGAIKFYEQQLGLAHQV | ||||||
Repeat | 754-787 | TPR 18 | ||||
Sequence: ASAYAALGTAYRMIQKYDKALGYHTQELEVYQEL | ||||||
Repeat | 794-827 | TPR 19 | ||||
Sequence: CRAHGHLAAVYMALGKYTMAFKCYEEQLDLGQKL | ||||||
Repeat | 834-867 | TPR 20 | ||||
Sequence: AQVYGNMGITKMNMNVMEEAIGYFEQQLAMLQQL | ||||||
Repeat | 877-910 | TPR 21 | ||||
Sequence: GRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQSL | ||||||
Repeat | 917-950 | TPR 22 | ||||
Sequence: AKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHEL | ||||||
Repeat | 957-990 | TPR 23 | ||||
Sequence: AQAYGELGSLHSQLGNYEQAISCLERQLNIARDM | ||||||
Repeat | 997-1030 | TPR 24 | ||||
Sequence: SDAACGLGGVYQQMGEYDTALQYHQLDLQIAEET | ||||||
Repeat | 1037-1070 | TPR 25 | ||||
Sequence: GRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQM | ||||||
Repeat | 1077-1110 | TPR 26 | ||||
Sequence: TVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQL | ||||||
Repeat | 1117-1150 | TPR 27 | ||||
Sequence: AKIRHGLGLSLWASGNLEEAQHQLYRASALFETI | ||||||
Repeat | 1169-1202 | TPR 28 | ||||
Sequence: TSSYQALQRVLVSLGHHDEALAVAERGRTRAFAD | ||||||
Region | 2004-2055 | Disordered | ||||
Sequence: FVSKPEGGSEGGGPGGRQDHDRSKNAYLQRSTLPRSQLPPQTRPAGNKDEEE | ||||||
Compositional bias | 2030-2046 | Polar residues | ||||
Sequence: YLQRSTLPRSQLPPQTR | ||||||
Region | 2075-2161 | Disordered | ||||
Sequence: NTCFSPDHKQPQPGTAGGMRVSVSSKGSISTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEESNPKLDPQE | ||||||
Compositional bias | 2091-2148 | Polar residues | ||||
Sequence: GGMRVSVSSKGSISTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVK | ||||||
Region | 2176-2339 | Disordered | ||||
Sequence: AVERLQRSGGQVSKSNNPEDGVQAPSSTAVFRASETSAFSRPVLSHQKSQPSPVTVKPKPPARSSSLPKVSSGYSSPTTSEMSIKDSPSQHSGRPSPGCDSQTSQLDQPLFKLKYPSSPYSAHISKSPRNMSPSSGHQSPAGSAPSPALSYSSAGSARSSPADA | ||||||
Compositional bias | 2183-2228 | Polar residues | ||||
Sequence: SGGQVSKSNNPEDGVQAPSSTAVFRASETSAFSRPVLSHQKSQPSP | ||||||
Compositional bias | 2240-2286 | Polar residues | ||||
Sequence: SSLPKVSSGYSSPTTSEMSIKDSPSQHSGRPSPGCDSQTSQLDQPLF | ||||||
Compositional bias | 2295-2334 | Polar residues | ||||
Sequence: YSAHISKSPRNMSPSSGHQSPAGSAPSPALSYSSAGSARS | ||||||
Region | 2420-2467 | Disordered | ||||
Sequence: QHDGAPPKAPPNGHWRTETTSLGSLPLPAGPPATAPARPLRLPSGNGY |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length2,481
- Mass (Da)270,884
- Last updated2008-12-16 v4
- ChecksumD646D744EBFCFE35
Computationally mapped potential isoform sequences
There are 3 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
B0QYP4 | B0QYP4_HUMAN | TTC28 | 108 | ||
B0QYP5 | B0QYP5_HUMAN | TTC28 | 301 | ||
A0A087WW06 | A0A087WW06_HUMAN | TTC28 | 2354 |
Sequence caution
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 2030-2046 | Polar residues | ||||
Sequence: YLQRSTLPRSQLPPQTR | ||||||
Compositional bias | 2091-2148 | Polar residues | ||||
Sequence: GGMRVSVSSKGSISTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVK | ||||||
Compositional bias | 2183-2228 | Polar residues | ||||
Sequence: SGGQVSKSNNPEDGVQAPSSTAVFRASETSAFSRPVLSHQKSQPSP | ||||||
Compositional bias | 2240-2286 | Polar residues | ||||
Sequence: SSLPKVSSGYSSPTTSEMSIKDSPSQHSGRPSPGCDSQTSQLDQPLF | ||||||
Compositional bias | 2295-2334 | Polar residues | ||||
Sequence: YSAHISKSPRNMSPSSGHQSPAGSAPSPALSYSSAGSARS |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AB665284 EMBL· GenBank· DDBJ | BAM66822.1 EMBL· GenBank· DDBJ | mRNA | ||
AL008724 EMBL· GenBank· DDBJ | CAB62963.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
AL008724 EMBL· GenBank· DDBJ | CAB62964.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
AL121825 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AL023281 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AL050313 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AL035453 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AL035397 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AL033538 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
ES313581 EMBL· GenBank· DDBJ | - | mRNA | No translation available. | |
BU584912 EMBL· GenBank· DDBJ | - | mRNA | No translation available. | |
AB028966 EMBL· GenBank· DDBJ | BAA82995.3 EMBL· GenBank· DDBJ | mRNA | ||
BC016465 EMBL· GenBank· DDBJ | AAH16465.1 EMBL· GenBank· DDBJ | mRNA | Different initiation | |
AL080174 EMBL· GenBank· DDBJ | CAB45760.2 EMBL· GenBank· DDBJ | mRNA | ||
AL137328 EMBL· GenBank· DDBJ | CAB70697.1 EMBL· GenBank· DDBJ | mRNA |