Q94AR6 · DOF31_ARATH

Function

function

Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.

Features

Showing features for binding site.

120420406080100120140160180200
TypeIDPosition(s)Description
Binding site31Zn2+ (UniProtKB | ChEBI)
Binding site34Zn2+ (UniProtKB | ChEBI)
Binding site56Zn2+ (UniProtKB | ChEBI)
Binding site59Zn2+ (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity
Molecular Functionmetal ion binding
Molecular Functiontranscription cis-regulatory region binding
Biological Processregulation of DNA-templated transcription

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Dof zinc finger protein DOF3.1
  • Short names
    AtDOF3.1

Gene names

    • Name
      DOF3.1
    • Synonyms
      ADOF2
    • ORF names
      MXL8.14
    • Ordered locus names
      At3g21270

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q94AR6
  • Secondary accessions
    • O82156

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00000742771-204Dof zinc finger protein DOF3.1

Proteomic databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for region, compositional bias, zinc finger.

TypeIDPosition(s)Description
Region1-25Disordered
Compositional bias9-25Polar residues
Zinc finger29-83Dof-type
Region70-128Disordered
Compositional bias80-105Polar residues
Compositional bias106-120Basic and acidic residues
Region182-204Disordered
Compositional bias183-197Polar residues

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    204
  • Mass (Da)
    22,530
  • Last updated
    2004-10-25 v2
  • Checksum
    4D6FBFD4DBC51759
MQDPAAYYQTMMAKQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRNSQKPDLDPTRMLYGFPIGDQDVKGMEIGGSFSSLLANNMQLGLGGGGIMLDGSGWDHPGMGLGLRRTEPGNNNNNPWTDLAMNRAEKN

Features

Showing features for compositional bias, sequence conflict.

TypeIDPosition(s)Description
Compositional bias9-25Polar residues
Compositional bias80-105Polar residues
Sequence conflict97in Ref. 4; AAK76521
Compositional bias106-120Basic and acidic residues
Compositional bias183-197Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AB017565
EMBL· GenBank· DDBJ
BAA33197.1
EMBL· GenBank· DDBJ
mRNA
AB023045
EMBL· GenBank· DDBJ
BAB01720.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002686
EMBL· GenBank· DDBJ
AEE76486.1
EMBL· GenBank· DDBJ
Genomic DNA
AY045847
EMBL· GenBank· DDBJ
AAK76521.1
EMBL· GenBank· DDBJ
mRNA
AY150391
EMBL· GenBank· DDBJ
AAN12936.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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