Q90X49 · CCD80_DANRE

Function

function

Promotes cell adhesion and matrix assembly.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentbasement membrane
Cellular Componentextracellular region
Biological Processextracellular matrix organization
Biological Processpositive regulation of cell-substrate adhesion
Biological Processsomitogenesis

Names & Taxonomy

Protein names

  • Recommended name
    Coiled-coil domain-containing protein 80

Gene names

    • Name
      ccdc80
    • Synonyms
      ssg1
    • ORF names
      si:bz20i5.2, zgc:113236

Organism names

  • Taxonomic identifier
  • Strain
    • Tuebingen
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Danionidae > Danioninae > Danio

Accessions

  • Primary accession
    Q90X49
  • Secondary accessions
    • Q5EAQ8

Proteomes

Organism-specific databases

PTM/Processing

Features

Showing features for signal, chain.

TypeIDPosition(s)Description
Signal1-18
ChainPRO_000028242219-867Coiled-coil domain-containing protein 80

Proteomic databases

Expression

Gene expression databases

Interaction

Subunit

Binds to various extracellular matrix proteins.

Protein-protein interaction databases

Family & Domains

Features

Showing features for region, compositional bias.

TypeIDPosition(s)Description
Region83-121Disordered
Region282-539Disordered
Compositional bias286-300Basic and acidic residues
Compositional bias301-375Polar residues
Compositional bias388-402Polar residues
Compositional bias403-419Basic and acidic residues
Compositional bias454-473Basic and acidic residues
Compositional bias480-525Basic and acidic residues

Sequence similarities

Belongs to the CCDC80 family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence & Isoform

Align isoforms (2)
  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.

This entry describes 2 isoforms produced by Alternative splicing.

Q90X49-1

This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

  • Length
    867
  • Mass (Da)
    99,920
  • Last updated
    2001-12-01 v1
  • Checksum
    3589AEBE33F41200
MRARYMLGFGVLCLLTWAVYVSESSPTDKQAKLRLMSVRRARQNKSRQGQIIKTRASSTWINDKRQQMQGDEGVQFRRNVQSRKVLAQRRPAQGGTRNPIQQDDGTPGARARVSRMPSSAGSPNLLASFAGKNRLLVISAPHDSDGYYRLMMSLLKPEVYCELAERHVHQIVMFHQEGELGGKIRRITNEGKVMEEPLDTALIPRLMTFLKLEKGKFGMVLLKKTLQVEERYPYPVRLEAMYEVIDQSPMRKMEKVRQKGFVQKCKGAGVEGQVVEGVLTTDSQVDPPTERRKEIRKPIRRPTTTTTPAPTRPTTTTTTTKATTTTTTRPPTTTRSTTTTTTTTTTTTRPTTTTTRTTTTPRTTRANTTPQWIPAHKTTAEPYYYNRRDRYQTTSPPTDSARYRDNHTSKKEYNHRHTNTIPTQHKPTKVRPTKKKNGDKDISNAYEEKYDVGVPTDAYPEEKEEEIVPTKRGKGKTDKKKKKDKTDKLSKKDKAERRGKDGKGGKKNGKKVPKILEKEDYQKPTKRPPPPPPPKGTLATFLDYFESRRRLILITSPTEENSMYIQQRDEYLEHVCEMAIRKVTIITIFGTFRNSTMKIDHYQLEKDKPMKGLRQEDLENQDLIMELRKEYGMTYNDFYVVLTDLDMKAKQYYEVPIAMKAVFDYIDTFSSRIREMEQQKRDGVTCKKEDKPRSLENFLSRFRWRRRLFVISAPNDEEWAYQQQLYALTSQACNLGLRHVSVLKLVGTDLLDMGGVLELYPINGSATVEREGISATLVRDIRNYFQISPEYFSMLLVGKDGNVKSWYPSPMWSMAIIYDLIDSMQLRRQEMAIQQSLGMRCPEDEYGGYGYHHHEGYQEGYHQGYGY

Q90X49-2

  • Name
    2
  • See also
    sequence in UniParc or sequence clusters in UniRef
  • Differences from canonical

Features

Showing features for alternative sequence, compositional bias, sequence conflict.

TypeIDPosition(s)Description
Alternative sequenceVSP_0241391-658in isoform 2
Compositional bias286-300Basic and acidic residues
Compositional bias301-375Polar residues
Compositional bias388-402Polar residues
Compositional bias403-419Basic and acidic residues
Compositional bias454-473Basic and acidic residues
Compositional bias480-525Basic and acidic residues
Sequence conflict751in Ref. 2; AAH90295

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AL590146
EMBL· GenBank· DDBJ
CAC94894.1
EMBL· GenBank· DDBJ
Genomic DNA
BC090295
EMBL· GenBank· DDBJ
AAH90295.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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