Q8N9W4 · GG6L2_HUMAN
- ProteinGolgin subfamily A member 6-like protein 2
- GeneGOLGA6L2
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids909 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score4/5
Function
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameGolgin subfamily A member 6-like protein 2
Gene names
Organism names
- Organism
- Taxonomic lineagecellular organisms > Eukaryota (eucaryotes) > Opisthokonta > Metazoa (metazoans) > Eumetazoa > Bilateria > Deuterostomia > Chordata (chordates) > Craniata > Vertebrata (vertebrates) > Gnathostomata (jawed vertebrates) > Teleostomi > Euteleostomi (bony vertebrates) > Sarcopterygii > Dipnotetrapodomorpha > Tetrapoda (tetrapods) > Amniota (amniotes) > Mammalia (mammals) > Theria > Eutheria (placentals) > Boreoeutheria > Euarchontoglires > Primates > Haplorrhini > Simiiformes > Catarrhini > Hominoidea (apes) > Hominidae (great apes) > Homininae > Homo
Accessions
- Primary accessionQ8N9W4
- Secondary accessions
Proteomes
Organism-specific databases
Disease & Variants
Features
Showing features for natural variant.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Natural variant | VAR_039173 | 43 | in dbSNP:rs2344900 | ||
Natural variant | VAR_039174 | 54 | in dbSNP:rs3866720 | ||
Natural variant | VAR_039175 | 64 | in dbSNP:rs2344899 | ||
Natural variant | VAR_039176 | 191 | in dbSNP:rs4778531 | ||
Natural variant | VAR_039177 | 235 | in dbSNP:rs12594944 | ||
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 1,550 variants from UniProt as well as other sources including ClinVar and dbSNP.
Organism-specific databases
Miscellaneous
Genetic variation databases
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Chain | PRO_0000320246 | 1-909 | Golgin subfamily A member 6-like protein 2 | ||
Proteomic databases
PTM databases
Expression
Interaction
Binary interactions
Type | Entry 1 | Entry 2 | Number of experiments | IntAct | |
---|---|---|---|---|---|
BINARY | Q8N9W4-2 | CBY2 Q8NA61 | 3 | EBI-10268729, EBI-741724 | |
BINARY | Q8N9W4-2 | GORASP2 Q9H8Y8 | 3 | EBI-10268729, EBI-739467 | |
BINARY | Q8N9W4-2 | KRT31 Q15323 | 3 | EBI-10268729, EBI-948001 | |
BINARY | Q8N9W4-2 | KRT33B Q14525 | 3 | EBI-10268729, EBI-1049638 | |
BINARY | Q8N9W4-2 | KRT40 Q6A162 | 3 | EBI-10268729, EBI-10171697 | |
BINARY | Q8N9W4-2 | MAGEB4 O15481 | 3 | EBI-10268729, EBI-751857 | |
BINARY | Q8N9W4-2 | NEK6 Q9HC98-4 | 3 | EBI-10268729, EBI-11750983 |
Protein-protein interaction databases
Miscellaneous
Structure
Family & Domains
Features
Showing features for region, compositional bias, coiled coil.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Region | 1-88 | Disordered | |||
Compositional bias | 17-31 | Basic and acidic residues | |||
Compositional bias | 54-73 | Polar residues | |||
Compositional bias | 74-88 | Basic and acidic residues | |||
Coiled coil | 192-526 | ||||
Region | 300-362 | Disordered | |||
Region | 381-408 | Disordered | |||
Region | 425-494 | Disordered | |||
Compositional bias | 524-547 | Basic and acidic residues | |||
Region | 524-909 | Disordered | |||
Compositional bias | 603-619 | Acidic residues | |||
Compositional bias | 621-635 | Basic and acidic residues | |||
Compositional bias | 698-714 | Basic residues | |||
Compositional bias | 716-737 | Basic and acidic residues | |||
Compositional bias | 754-768 | Acidic residues | |||
Compositional bias | 871-892 | Basic and acidic residues | |||
Sequence similarities
Belongs to the GOLGA6 family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence & Isoforms
- Sequence statusComplete
This entry describes 3 isoforms produced by Alternative splicing.
Q8N9W4-3
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Name3
- Length909
- Mass (Da)100,610
- Last updated2018-07-18 v3
- MD5 Checksum52C6CC0BA6D95B2117897121B8F1D903
Q8N9W4-1
- Name1
Q8N9W4-2
- Name2
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
H3BS38 | H3BS38_HUMAN | GOLGA6L2 | 208 |
Sequence caution
Features
Showing features for compositional bias, alternative sequence, sequence conflict.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 17-31 | Basic and acidic residues | |||
Compositional bias | 54-73 | Polar residues | |||
Compositional bias | 74-88 | Basic and acidic residues | |||
Alternative sequence | VSP_059650 | 308-362 | in isoform 2 | ||
Sequence conflict | 317 | in Ref. 1; BAC04173 | |||
Alternative sequence | VSP_059651 | 376-481 | in isoform 2 | ||
Alternative sequence | VSP_059652 | 482-909 | in isoform 2 | ||
Compositional bias | 524-547 | Basic and acidic residues | |||
Sequence conflict | 535-536 | in Ref. 1; BAC04173 | |||
Sequence conflict | 540-541 | in Ref. 1; BAC04173 | |||
Alternative sequence | VSP_059653 | 544-650 | in isoform 1 | ||
Sequence conflict | 545 | In isoform Q8N9W4-1; in Ref. 1; BAC04173 | |||
Compositional bias | 603-619 | Acidic residues | |||
Compositional bias | 621-635 | Basic and acidic residues | |||
Alternative sequence | VSP_059654 | 651-909 | in isoform 1 | ||
Compositional bias | 698-714 | Basic residues | |||
Compositional bias | 716-737 | Basic and acidic residues | |||
Compositional bias | 754-768 | Acidic residues | |||
Compositional bias | 871-892 | Basic and acidic residues | |||
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AK093463 EMBL· GenBank· DDBJ | BAC04173.1 EMBL· GenBank· DDBJ | mRNA | ||
AC073446 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
BC129820 EMBL· GenBank· DDBJ | AAI29821.1 EMBL· GenBank· DDBJ | mRNA | Different initiation |