Q8LHP0 · ELOF1_ORYSJ

Function

function

Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions.

Features

Showing features for binding site.

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MGKRKSAAKPPPKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQENFSTTVNALTEPIDIYSEWIDECERVNNVEDDDGA
TypeIDPosition(s)Description
Binding site25Zn2+ (UniProtKB | ChEBI)
Binding site28Zn2+ (UniProtKB | ChEBI)
Binding site49Zn2+ (UniProtKB | ChEBI)
Binding site52Zn2+ (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componenttranscription elongation factor complex
Molecular Functionmetal ion binding
Molecular FunctionRNA polymerase II complex binding
Biological Processtranscription elongation by RNA polymerase II

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Transcription elongation factor 1 homolog

Gene names

    • ORF names
      OsJ_25233
      , P0519E12.3
    • Ordered locus names
      Os07g0631100
      , LOC_Os07g43730

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q8LHP0
  • Secondary accessions
    • A0A0P0X940
    • Q0D4E9

Proteomes

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00001209471-89Transcription elongation factor 1 homolog

Proteomic databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Sequence similarities

Belongs to the ELOF1 family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    89
  • Mass (Da)
    10,000
  • Last updated
    2002-10-01 v1
  • Checksum
    28EF24F0AB93B89F
MGKRKSAAKPPPKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQENFSTTVNALTEPIDIYSEWIDECERVNNVEDDDGA

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AP004339
EMBL· GenBank· DDBJ
BAC10134.1
EMBL· GenBank· DDBJ
Genomic DNA
AP008213
EMBL· GenBank· DDBJ
BAF22274.1
EMBL· GenBank· DDBJ
Genomic DNA
AP014963
EMBL· GenBank· DDBJ
BAT02772.1
EMBL· GenBank· DDBJ
Genomic DNA
CM000144
EMBL· GenBank· DDBJ
EAZ40760.1
EMBL· GenBank· DDBJ
Genomic DNA
AK061633
EMBL· GenBank· DDBJ
-mRNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

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