Q8LF65 · ATL17_ARATH

Function

function

May be involved in the early steps of the plant defense signaling pathway.

Catalytic activity

  • S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N6-ubiquitinyl-[acceptor protein]-L-lysine.
    EC:2.3.2.27 (UniProtKB | ENZYME | Rhea)

Pathway

Protein modification; protein ubiquitination.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentmembrane
Molecular Functionmetal ion binding
Molecular Functiontransferase activity
Biological Processdefense response
Biological Processprotein ubiquitination

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    RING-H2 finger protein ATL17
  • EC number
  • Alternative names
    • RING-type E3 ubiquitin transferase ATL17

Gene names

    • Name
      ATL17
    • ORF names
      dl4025w, FCAALL.90
    • Ordered locus names
      At4g15975

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    Q8LF65
  • Secondary accessions
    • F4JKY8
    • O23446

Proteomes

Organism-specific databases

Subcellular Location

Membrane
; Single-pass membrane protein

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane1-21Helical

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00000558011-235RING-H2 finger protein ATL17

Proteomic databases

Expression

Induction

Up-regulated by chitin.

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for zinc finger, region, compositional bias.

TypeIDPosition(s)Description
Zinc finger76-118RING-type; atypical
Region143-167Disordered
Compositional bias147-161Basic and acidic residues

Domain

The RING-type zinc finger domain mediates binding to an E2 ubiquitin-conjugating enzyme.

Sequence similarities

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    235
  • Mass (Da)
    26,319
  • Last updated
    2005-07-05 v2
  • Checksum
    C0597FA6ECF48E88
MLTTTILILLIVILMVSLHLYYRWYLLRSSPFNRTTAASTFFTDPSSTPGGLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQIEPFAGGVKSSMDEVAISISDPVYGDTNHHEGTETTGDSVPEDSQRKPAAIEISQRNLGEIENDLSRSHSFRSPTDEPDDIFHSEFESRSGEVLLLLLLLSEFLIFCFRRSVACK

Sequence caution

The sequence CAB10376.1 differs from that shown. Reason: Erroneous gene model prediction The predicted gene At4g15970 has been split into 2 genes: At4g15970 and At4g15975.
The sequence CAB78639.1 differs from that shown. Reason: Erroneous gene model prediction The predicted gene At4g15970 has been split into 2 genes: At4g15970 and At4g15975.

Features

Showing features for sequence conflict, compositional bias.

TypeIDPosition(s)Description
Sequence conflict71-72in Ref. 4; AAM61585
Sequence conflict75in Ref. 4; AAM61585
Sequence conflict102in Ref. 3; AEE83676 and 4; AAM61585
Sequence conflict120in Ref. 3; AEE83676 and 4; AAM61585
Sequence conflict131in Ref. 3; AEE83676 and 4; AAM61585
Compositional bias147-161Basic and acidic residues
Sequence conflict224in Ref. 3; AEE83676 and 4; AAM61585

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
Z97340
EMBL· GenBank· DDBJ
CAB10376.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
AL161542
EMBL· GenBank· DDBJ
CAB78639.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
CP002687
EMBL· GenBank· DDBJ
AEE83676.1
EMBL· GenBank· DDBJ
Genomic DNA
AY085027
EMBL· GenBank· DDBJ
AAM61585.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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